CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4467
PRO 10.1331
GLN 20.1539
ILE 30.2518
THR 40.1410
LEU 50.0943
TRP 60.1515
GLN 70.1171
ARG 80.0877
PRO 90.0650
LEU 100.0579
VAL 110.0423
THR 120.0417
ILE 130.0328
LYS 140.0530
ILE 150.0568
GLY 160.0777
GLY 170.0914
GLN 180.0863
LEU 190.0711
LYS 200.0636
GLU 210.0550
ALA 220.0473
LEU 230.0579
LEU 240.0486
ASP 250.0719
THR 260.0856
GLY 270.1038
ALA 280.0867
ASP 290.0864
ASP 300.0626
THR 310.0441
VAL 320.0455
LEU 330.0418
GLU 340.0425
GLU 350.0397
MET 360.0563
SER 370.0838
LEU 380.0515
PRO 390.0951
GLY 400.0819
ARG 410.0795
TRP 420.0751
LYS 430.0856
PRO 440.0844
LYS 450.0629
MET 460.0584
ILE 470.0715
GLY 480.1705
GLY 490.2295
ILE 500.4182
GLY 510.4467
GLY 520.1875
PHE 530.0916
ILE 540.0527
LYS 550.0149
VAL 560.0208
ARG 570.0460
GLN 580.0435
TYR 590.0270
ASP 600.0266
GLN 610.0430
ILE 620.0299
LEU 630.0488
ILE 640.0333
GLU 650.0380
ILE 660.0153
CYS 670.0170
GLY 680.0431
HIS 690.0488
LYS 700.0598
ALA 710.0500
ILE 720.0536
GLY 730.0421
THR 740.0320
VAL 750.0279
LEU 760.0329
VAL 770.0358
GLY 780.0306
PRO 790.0217
THR 800.0397
PRO 810.0436
VAL 820.0618
ASN 830.0534
ILE 840.0549
ILE 850.0401
GLY 860.0584
ARG 870.0717
ASN 880.0636
LEU 890.0455
LEU 900.0535
THR 910.0769
GLN 920.0692
ILE 930.0557
GLY 940.0824
CYS 950.0736
THR 960.1354
LEU 970.1592
ASN 980.0498
PHE 990.0365

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.