CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

CA distance fluctuations for 2604200934113787483

---  normal mode 16  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ASN 98 0.42 PRO 1 -0.54 GLY 68
ASN 98 0.18 GLN 2 -0.44 HIS 69
GLN 7 0.21 ILE 3 -1.12 CYS 95
ILE 50 0.16 THR 4 -0.75 LEU 97
GLY 48 0.19 LEU 5 -0.75 LEU 97
ILE 50 0.30 TRP 6 -0.61 LEU 97
ILE 50 0.41 GLN 7 -0.46 LEU 97
ILE 50 0.41 ARG 8 -0.36 LEU 97
ILE 50 0.30 PRO 9 -0.30 LEU 97
ILE 50 0.39 LEU 10 -0.17 LEU 97
ILE 50 0.36 VAL 11 -0.16 PRO 39
ILE 50 0.41 THR 12 -0.19 PRO 39
ILE 50 0.37 ILE 13 -0.21 PRO 1
ILE 50 0.39 LYS 14 -0.24 PRO 1
ILE 50 0.39 ILE 15 -0.32 PRO 39
MET 36 0.46 GLY 16 -0.44 PRO 39
ILE 50 0.43 GLY 17 -0.31 PRO 39
ILE 50 0.51 GLN 18 -0.35 PRO 39
ILE 50 0.50 LEU 19 -0.28 PRO 39
ILE 50 0.56 LYS 20 -0.26 PRO 39
ILE 50 0.53 GLU 21 -0.20 PRO 39
ILE 50 0.45 ALA 22 -0.15 PRO 39
ILE 50 0.33 LEU 23 -0.16 ILE 3
GLY 48 0.17 LEU 24 -0.44 ILE 3
GLY 48 0.13 ASP 25 -0.38 ILE 3
PRO 1 0.15 THR 26 -0.50 ILE 3
PRO 1 0.13 GLY 27 -0.34 ILE 3
LYS 45 0.11 ALA 28 -0.34 ILE 3
LYS 43 0.11 ASP 29 -0.38 ILE 3
LYS 43 0.11 ASP 30 -0.35 ILE 3
ILE 50 0.10 THR 31 -0.32 ILE 3
GLY 49 0.28 VAL 32 -0.22 ILE 3
ILE 50 0.45 LEU 33 -0.17 LEU 38
ILE 50 0.62 GLU 34 -0.13 LEU 38
ILE 50 0.57 GLU 35 -0.09 PRO 44
ILE 50 0.47 MET 36 -0.08 ILE 3
GLY 51 0.43 SER 37 -0.23 LYS 20
GLY 51 0.28 LEU 38 -0.22 LYS 20
GLY 51 0.27 PRO 39 -0.44 GLY 16
GLY 51 0.23 GLY 40 -0.29 GLY 16
GLY 51 0.18 ARG 41 -0.22 ILE 3
GLY 51 0.17 TRP 42 -0.21 ILE 3
ASP 29 0.11 LYS 43 -0.18 ILE 3
GLY 51 0.11 PRO 44 -0.15 ILE 3
ARG 8 0.14 LYS 45 -0.15 ILE 3
THR 80 0.21 MET 46 -0.12 ILE 3
THR 80 0.39 ILE 47 -0.18 ASP 29
THR 80 0.66 GLY 48 -0.24 ASP 29
PRO 81 1.01 GLY 49 -0.33 ASP 29
PRO 81 1.08 ILE 50 -0.32 GLY 27
PRO 81 0.79 GLY 51 -0.25 ASP 29
PRO 81 0.51 GLY 52 -0.20 ASP 29
PRO 81 0.33 PHE 53 -0.17 ASP 29
GLY 51 0.24 ILE 54 -0.26 ASP 29
GLY 51 0.21 LYS 55 -0.14 ILE 3
GLY 51 0.26 VAL 56 -0.16 ILE 3
GLY 51 0.23 ARG 57 -0.18 ILE 3
GLY 51 0.13 GLN 58 -0.22 ILE 3
GLY 51 0.15 TYR 59 -0.26 ILE 3
SER 37 0.13 ASP 60 -0.29 ILE 3
MET 36 0.17 GLN 61 -0.32 ILE 3
MET 36 0.24 ILE 62 -0.30 ILE 3
MET 36 0.25 LEU 63 -0.32 ILE 3
ILE 50 0.25 ILE 64 -0.32 ILE 3
ILE 50 0.25 GLU 65 -0.34 ILE 3
ILE 50 0.23 ILE 66 -0.42 ILE 3
ILE 50 0.24 CYS 67 -0.48 PRO 1
ILE 50 0.23 GLY 68 -0.54 PRO 1
ILE 50 0.16 HIS 69 -0.49 ILE 3
MET 36 0.16 LYS 70 -0.42 ILE 3
MET 36 0.15 ALA 71 -0.47 ILE 3
MET 36 0.17 ILE 72 -0.41 ILE 3
MET 36 0.13 GLY 73 -0.40 ILE 3
MET 36 0.12 THR 74 -0.33 ILE 3
ILE 50 0.15 VAL 75 -0.29 ILE 3
ILE 50 0.18 LEU 76 -0.23 ILE 3
ILE 50 0.37 VAL 77 -0.17 ILE 3
ILE 50 0.48 GLY 78 -0.12 ILE 3
ILE 50 0.74 PRO 79 -0.11 ALA 28
GLY 49 0.90 THR 80 -0.12 ALA 28
ILE 50 1.08 PRO 81 -0.12 GLY 27
ILE 50 0.75 VAL 82 -0.11 LEU 38
ILE 50 0.54 ASN 83 -0.14 LEU 38
GLY 48 0.32 ILE 84 -0.23 ILE 3
ILE 50 0.16 ILE 85 -0.39 ILE 3
LYS 45 0.07 GLY 86 -0.44 ILE 3
LYS 43 0.07 ARG 87 -0.54 ILE 3
LYS 43 0.08 ASN 88 -0.49 ILE 3
MET 36 0.09 LEU 89 -0.55 ILE 3
MET 36 0.06 LEU 90 -0.73 ILE 3
LEU 97 0.09 THR 91 -0.69 ILE 3
MET 36 0.10 GLN 92 -0.63 ILE 3
MET 36 0.09 ILE 93 -0.74 ILE 3
MET 36 0.07 GLY 94 -0.86 ILE 3
PRO 1 0.07 CYS 95 -1.12 ILE 3
PRO 1 0.31 THR 96 -0.90 ILE 3
PRO 1 0.13 LEU 97 -0.93 ILE 3
PRO 1 0.42 ASN 98 -0.49 ILE 3

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.