CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4657
PRO 10.0543
GLN 20.0483
ILE 30.0867
THR 40.0582
LEU 50.0033
TRP 60.0271
GLN 70.0748
ARG 80.0745
PRO 90.0489
LEU 100.0481
VAL 110.0325
THR 120.0375
ILE 130.0282
LYS 140.0778
ILE 150.1508
GLY 160.2865
GLY 170.2676
GLN 180.1633
LEU 190.0884
LYS 200.0150
GLU 210.0308
ALA 220.0278
LEU 230.0337
LEU 240.0220
ASP 250.0278
THR 260.0416
GLY 270.0560
ALA 280.0437
ASP 290.0444
ASP 300.0349
THR 310.0374
VAL 320.0420
LEU 330.0382
GLU 340.0530
GLU 350.0940
MET 360.1707
SER 370.2897
LEU 380.3519
PRO 390.4657
GLY 400.0750
ARG 410.1631
TRP 420.0805
LYS 430.0835
PRO 440.0730
LYS 450.0754
MET 460.0801
ILE 470.0667
GLY 480.0705
GLY 490.0636
ILE 500.1284
GLY 510.1390
GLY 520.0844
PHE 530.0879
ILE 540.0742
LYS 550.0513
VAL 560.0335
ARG 570.0553
GLN 580.0802
TYR 590.0890
ASP 600.0261
GLN 610.0421
ILE 620.0664
LEU 630.0781
ILE 640.0672
GLU 650.0363
ILE 660.0247
CYS 670.0226
GLY 680.0287
HIS 690.0440
LYS 700.0661
ALA 710.0585
ILE 720.0640
GLY 730.0309
THR 740.0272
VAL 750.0583
LEU 760.0549
VAL 770.0447
GLY 780.0295
PRO 790.0772
THR 800.0555
PRO 810.0693
VAL 820.0310
ASN 830.0313
ILE 840.0353
ILE 850.0259
GLY 860.0235
ARG 870.0299
ASN 880.0234
LEU 890.0247
LEU 900.0351
THR 910.0444
GLN 920.0531
ILE 930.0538
GLY 940.0558
CYS 950.0687
THR 960.0719
LEU 970.1271
ASN 980.0469
PHE 990.0513

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.