CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3315
PRO 10.3251
GLN 20.2462
ILE 30.3020
THR 40.3105
LEU 50.0606
TRP 60.2396
GLN 70.3315
ARG 80.1438
PRO 90.1135
LEU 100.0307
VAL 110.0691
THR 120.0936
ILE 130.0833
LYS 140.0514
ILE 150.0658
GLY 160.1409
GLY 170.0743
GLN 180.0862
LEU 190.1297
LYS 200.1520
GLU 210.0831
ALA 220.0708
LEU 230.0708
LEU 240.0724
ASP 250.0832
THR 260.0887
GLY 270.1022
ALA 280.0805
ASP 290.0683
ASP 300.0514
THR 310.0295
VAL 320.0381
LEU 330.0153
GLU 340.0151
GLU 350.0583
MET 360.0930
SER 370.0972
LEU 380.0742
PRO 390.0491
GLY 400.0892
ARG 410.1012
TRP 420.0497
LYS 430.0632
PRO 440.0731
LYS 450.0745
MET 460.1063
ILE 470.1144
GLY 480.0708
GLY 490.0624
ILE 500.1887
GLY 510.1340
GLY 520.0305
PHE 530.0539
ILE 540.0522
LYS 550.0507
VAL 560.0238
ARG 570.0247
GLN 580.0241
TYR 590.0332
ASP 600.0198
GLN 610.0235
ILE 620.0358
LEU 630.0285
ILE 640.0314
GLU 650.0331
ILE 660.0474
CYS 670.0797
GLY 680.0780
HIS 690.0502
LYS 700.0251
ALA 710.0213
ILE 720.0143
GLY 730.0121
THR 740.0246
VAL 750.0409
LEU 760.0566
VAL 770.0465
GLY 780.0709
PRO 790.0852
THR 800.0773
PRO 810.0882
VAL 820.0813
ASN 830.0660
ILE 840.0554
ILE 850.0474
GLY 860.0501
ARG 870.0444
ASN 880.0213
LEU 890.0260
LEU 900.0464
THR 910.0339
GLN 920.0458
ILE 930.0703
GLY 940.0714
CYS 950.0764
THR 960.0407
LEU 970.0861
ASN 980.0349
PHE 990.0428

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.