CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 27  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3564
PRO 10.0336
GLN 20.0206
ILE 30.0284
THR 40.0508
LEU 50.0095
TRP 60.0447
GLN 70.0432
ARG 80.0200
PRO 90.0251
LEU 100.0115
VAL 110.0067
THR 120.0234
ILE 130.0389
LYS 140.0126
ILE 150.0450
GLY 160.0964
GLY 170.0812
GLN 180.0382
LEU 190.0142
LYS 200.0297
GLU 210.0129
ALA 220.0227
LEU 230.0202
LEU 240.0164
ASP 250.0367
THR 260.0379
GLY 270.0598
ALA 280.0533
ASP 290.0512
ASP 300.0580
THR 310.0513
VAL 320.0548
LEU 330.0491
GLU 340.0484
GLU 350.0668
MET 360.1888
SER 370.1299
LEU 380.1448
PRO 390.1361
GLY 400.1917
ARG 410.2613
TRP 420.1001
LYS 430.1267
PRO 440.0936
LYS 450.0513
MET 460.2112
ILE 470.2609
GLY 480.2246
GLY 490.1098
ILE 500.2636
GLY 510.3442
GLY 520.3564
PHE 530.2447
ILE 540.1118
LYS 550.0704
VAL 560.0833
ARG 570.0735
GLN 580.0663
TYR 590.0529
ASP 600.0644
GLN 610.0638
ILE 620.0529
LEU 630.0649
ILE 640.0541
GLU 650.0505
ILE 660.0485
CYS 670.0516
GLY 680.0504
HIS 690.0577
LYS 700.0629
ALA 710.0571
ILE 720.0552
GLY 730.0455
THR 740.0511
VAL 750.0488
LEU 760.0502
VAL 770.0561
GLY 780.0542
PRO 790.0462
THR 800.0569
PRO 810.0576
VAL 820.0480
ASN 830.0513
ILE 840.0464
ILE 850.0259
GLY 860.0284
ARG 870.0167
ASN 880.0420
LEU 890.0364
LEU 900.0222
THR 910.0398
GLN 920.0688
ILE 930.0704
GLY 940.0772
CYS 950.0625
THR 960.0648
LEU 970.0729
ASN 980.0471
PHE 990.0521

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.