CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.5360
PRO 10.0328
GLN 20.0150
ILE 30.0231
THR 40.0368
LEU 50.0190
TRP 60.0280
GLN 70.0305
ARG 80.0152
PRO 90.0171
LEU 100.0254
VAL 110.0267
THR 120.0276
ILE 130.0407
LYS 140.0577
ILE 150.0612
GLY 160.0632
GLY 170.0869
GLN 180.1412
LEU 190.1067
LYS 200.0807
GLU 210.0223
ALA 220.0306
LEU 230.0243
LEU 240.0387
ASP 250.0417
THR 260.0510
GLY 270.0673
ALA 280.0485
ASP 290.0522
ASP 300.0438
THR 310.0345
VAL 320.0463
LEU 330.0593
GLU 340.0901
GLU 350.1118
MET 360.0956
SER 370.0648
LEU 380.0284
PRO 390.1318
GLY 400.0238
ARG 410.1575
TRP 420.0416
LYS 430.0562
PRO 440.0805
LYS 450.0667
MET 460.0450
ILE 470.1907
GLY 480.3358
GLY 490.4129
ILE 500.5360
GLY 510.0988
GLY 520.0917
PHE 530.0779
ILE 540.2085
LYS 550.1466
VAL 560.1553
ARG 570.0504
GLN 580.0326
TYR 590.0244
ASP 600.0110
GLN 610.0340
ILE 620.0552
LEU 630.0343
ILE 640.0266
GLU 650.0204
ILE 660.0170
CYS 670.0449
GLY 680.0555
HIS 690.0195
LYS 700.0089
ALA 710.0170
ILE 720.0313
GLY 730.0306
THR 740.0246
VAL 750.0608
LEU 760.0822
VAL 770.0829
GLY 780.1019
PRO 790.1101
THR 800.0887
PRO 810.1255
VAL 820.0289
ASN 830.0128
ILE 840.0068
ILE 850.0096
GLY 860.0150
ARG 870.0171
ASN 880.0184
LEU 890.0142
LEU 900.0123
THR 910.0220
GLN 920.0266
ILE 930.0260
GLY 940.0403
CYS 950.0331
THR 960.0199
LEU 970.0381
ASN 980.0132
PHE 990.0178

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.