CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 29  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3916
PRO 10.0783
GLN 20.0389
ILE 30.0490
THR 40.0623
LEU 50.0065
TRP 60.0655
GLN 70.0618
ARG 80.0555
PRO 90.0480
LEU 100.1202
VAL 110.1636
THR 120.0556
ILE 130.1404
LYS 140.1259
ILE 150.1175
GLY 160.0594
GLY 170.1464
GLN 180.0643
LEU 190.0389
LYS 200.0473
GLU 210.0958
ALA 220.1383
LEU 230.0708
LEU 240.1172
ASP 250.1298
THR 260.1498
GLY 270.1645
ALA 280.1219
ASP 290.1048
ASP 300.0660
THR 310.0474
VAL 320.0419
LEU 330.0255
GLU 340.0192
GLU 350.0437
MET 360.0592
SER 370.0809
LEU 380.0262
PRO 390.0272
GLY 400.0431
ARG 410.0571
TRP 420.0294
LYS 430.0445
PRO 440.0386
LYS 450.0381
MET 460.0136
ILE 470.0361
GLY 480.0570
GLY 490.0321
ILE 500.0376
GLY 510.0390
GLY 520.0591
PHE 530.0350
ILE 540.0311
LYS 550.0318
VAL 560.0418
ARG 570.0301
GLN 580.0264
TYR 590.0262
ASP 600.0335
GLN 610.0467
ILE 620.0583
LEU 630.0406
ILE 640.1229
GLU 650.1837
ILE 660.2577
CYS 670.3916
GLY 680.3188
HIS 690.1222
LYS 700.0850
ALA 710.0564
ILE 720.0522
GLY 730.0705
THR 740.0194
VAL 750.0337
LEU 760.0380
VAL 770.0475
GLY 780.0603
PRO 790.0725
THR 800.0700
PRO 810.1005
VAL 820.0836
ASN 830.0460
ILE 840.0522
ILE 850.0837
GLY 860.0859
ARG 870.0807
ASN 880.0403
LEU 890.0443
LEU 900.0875
THR 910.0565
GLN 920.1122
ILE 930.1602
GLY 940.1892
CYS 950.1624
THR 960.1325
LEU 970.1664
ASN 980.0918
PHE 990.1086

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.