CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.5105
PRO 10.1349
GLN 20.0452
ILE 30.1408
THR 40.1810
LEU 50.0774
TRP 60.1623
GLN 70.1041
ARG 80.1473
PRO 90.1051
LEU 100.0996
VAL 110.0480
THR 120.0267
ILE 130.0421
LYS 140.0358
ILE 150.0383
GLY 160.0318
GLY 170.0738
GLN 180.1094
LEU 190.0620
LYS 200.0394
GLU 210.0529
ALA 220.0927
LEU 230.0713
LEU 240.0461
ASP 250.0529
THR 260.0664
GLY 270.1214
ALA 280.1032
ASP 290.0991
ASP 300.0876
THR 310.1023
VAL 320.0861
LEU 330.0572
GLU 340.1124
GLU 350.0453
MET 360.2369
SER 370.3068
LEU 380.1901
PRO 390.1923
GLY 400.1253
ARG 410.1815
TRP 420.0771
LYS 430.0352
PRO 440.0134
LYS 450.0297
MET 460.0311
ILE 470.0417
GLY 480.0194
GLY 490.0635
ILE 500.0358
GLY 510.0265
GLY 520.0214
PHE 530.0270
ILE 540.0695
LYS 550.0286
VAL 560.0236
ARG 570.0233
GLN 580.0461
TYR 590.0624
ASP 600.0691
GLN 610.0382
ILE 620.0487
LEU 630.0472
ILE 640.0419
GLU 650.0242
ILE 660.0230
CYS 670.0448
GLY 680.0484
HIS 690.0206
LYS 700.0367
ALA 710.0248
ILE 720.0209
GLY 730.0335
THR 740.0576
VAL 750.0874
LEU 760.0547
VAL 770.0404
GLY 780.0255
PRO 790.0658
THR 800.1483
PRO 810.5105
VAL 820.0761
ASN 830.0503
ILE 840.0911
ILE 850.0749
GLY 860.0633
ARG 870.0518
ASN 880.0558
LEU 890.0347
LEU 900.0154
THR 910.0371
GLN 920.0047
ILE 930.0292
GLY 940.0728
CYS 950.1134
THR 960.1221
LEU 970.0609
ASN 980.0424
PHE 990.0513

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.