CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3454
PRO 10.1942
GLN 20.0730
ILE 30.2318
THR 40.1482
LEU 50.1280
TRP 60.1513
GLN 70.1751
ARG 80.3395
PRO 90.1822
LEU 100.0324
VAL 110.0965
THR 120.0430
ILE 130.0380
LYS 140.0426
ILE 150.0481
GLY 160.1344
GLY 170.0702
GLN 180.0948
LEU 190.0888
LYS 200.0665
GLU 210.0540
ALA 220.0383
LEU 230.0925
LEU 240.1340
ASP 250.1202
THR 260.0922
GLY 270.0974
ALA 280.0694
ASP 290.0402
ASP 300.0329
THR 310.0427
VAL 320.0186
LEU 330.0297
GLU 340.0338
GLU 350.0719
MET 360.0756
SER 370.0691
LEU 380.0395
PRO 390.0234
GLY 400.0948
ARG 410.1227
TRP 420.0931
LYS 430.0912
PRO 440.0196
LYS 450.0154
MET 460.0348
ILE 470.0413
GLY 480.0398
GLY 490.0450
ILE 500.0402
GLY 510.0346
GLY 520.0416
PHE 530.0420
ILE 540.0477
LYS 550.0427
VAL 560.0417
ARG 570.0362
GLN 580.0229
TYR 590.0238
ASP 600.0563
GLN 610.0477
ILE 620.0290
LEU 630.0326
ILE 640.0251
GLU 650.0482
ILE 660.0913
CYS 670.1554
GLY 680.1315
HIS 690.0479
LYS 700.0312
ALA 710.0208
ILE 720.0319
GLY 730.0476
THR 740.0380
VAL 750.0330
LEU 760.0126
VAL 770.0366
GLY 780.0549
PRO 790.0600
THR 800.0402
PRO 810.0664
VAL 820.0374
ASN 830.0459
ILE 840.0689
ILE 850.0884
GLY 860.0615
ARG 870.0525
ASN 880.0471
LEU 890.0562
LEU 900.0798
THR 910.0287
GLN 920.0513
ILE 930.0288
GLY 940.1480
CYS 950.2104
THR 960.3454
LEU 970.2673
ASN 980.1600
PHE 990.2011

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.