CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 38  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4173
PRO 10.1705
GLN 20.0805
ILE 30.2200
THR 40.2062
LEU 50.0909
TRP 60.1392
GLN 70.0992
ARG 80.1348
PRO 90.1475
LEU 100.0381
VAL 110.0799
THR 120.0704
ILE 130.0978
LYS 140.0451
ILE 150.1252
GLY 160.2613
GLY 170.1964
GLN 180.4173
LEU 190.1633
LYS 200.0886
GLU 210.1045
ALA 220.0604
LEU 230.0187
LEU 240.0130
ASP 250.0335
THR 260.0377
GLY 270.0780
ALA 280.0639
ASP 290.0532
ASP 300.0421
THR 310.0500
VAL 320.0372
LEU 330.0405
GLU 340.0478
GLU 350.0428
MET 360.1672
SER 370.2088
LEU 380.1136
PRO 390.1145
GLY 400.1042
ARG 410.1156
TRP 420.0598
LYS 430.0467
PRO 440.0684
LYS 450.0688
MET 460.0614
ILE 470.0385
GLY 480.0482
GLY 490.0314
ILE 500.0157
GLY 510.0272
GLY 520.0984
PHE 530.0351
ILE 540.0608
LYS 550.0552
VAL 560.0547
ARG 570.0377
GLN 580.0382
TYR 590.0355
ASP 600.0728
GLN 610.1038
ILE 620.1014
LEU 630.0795
ILE 640.1244
GLU 650.0909
ILE 660.1036
CYS 670.0976
GLY 680.1109
HIS 690.0824
LYS 700.0730
ALA 710.0535
ILE 720.0195
GLY 730.0299
THR 740.0382
VAL 750.0404
LEU 760.0407
VAL 770.0460
GLY 780.0410
PRO 790.0529
THR 800.0313
PRO 810.0840
VAL 820.0759
ASN 830.0803
ILE 840.0627
ILE 850.0407
GLY 860.0361
ARG 870.0277
ASN 880.0233
LEU 890.0159
LEU 900.0163
THR 910.0323
GLN 920.0542
ILE 930.0699
GLY 940.0653
CYS 950.1331
THR 960.1710
LEU 970.0875
ASN 980.0739
PHE 990.0920

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.