CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2357
PRO 10.1300
GLN 20.0645
ILE 30.1725
THR 40.1084
LEU 50.1020
TRP 60.1185
GLN 70.1316
ARG 80.2357
PRO 90.1173
LEU 100.0401
VAL 110.0491
THR 120.0373
ILE 130.0583
LYS 140.0873
ILE 150.0737
GLY 160.1402
GLY 170.1473
GLN 180.0698
LEU 190.0773
LYS 200.0727
GLU 210.0931
ALA 220.0666
LEU 230.0413
LEU 240.0386
ASP 250.0545
THR 260.0774
GLY 270.1346
ALA 280.1178
ASP 290.1245
ASP 300.1254
THR 310.1334
VAL 320.1009
LEU 330.0691
GLU 340.0298
GLU 350.0854
MET 360.1303
SER 370.1078
LEU 380.1173
PRO 390.1036
GLY 400.0762
ARG 410.1542
TRP 420.1347
LYS 430.1720
PRO 440.0222
LYS 450.0528
MET 460.0610
ILE 470.0809
GLY 480.0578
GLY 490.0764
ILE 500.0559
GLY 510.0498
GLY 520.0548
PHE 530.0484
ILE 540.0593
LYS 550.0611
VAL 560.0792
ARG 570.0290
GLN 580.0476
TYR 590.0333
ASP 600.0933
GLN 610.1192
ILE 620.1427
LEU 630.1442
ILE 640.1946
GLU 650.1483
ILE 660.0934
CYS 670.0819
GLY 680.0971
HIS 690.0904
LYS 700.1219
ALA 710.0586
ILE 720.0598
GLY 730.1048
THR 740.0947
VAL 750.0843
LEU 760.0520
VAL 770.0117
GLY 780.0795
PRO 790.1185
THR 800.1049
PRO 810.1545
VAL 820.0991
ASN 830.1044
ILE 840.1044
ILE 850.0850
GLY 860.0738
ARG 870.0554
ASN 880.0852
LEU 890.0775
LEU 900.0530
THR 910.0733
GLN 920.1078
ILE 930.0793
GLY 940.1129
CYS 950.1144
THR 960.1549
LEU 970.1119
ASN 980.1042
PHE 990.1091

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.