CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3142
PRO 10.0072
GLN 20.0057
ILE 30.0215
THR 40.1173
LEU 50.0403
TRP 60.2147
GLN 70.2013
ARG 80.2410
PRO 90.0457
LEU 100.0185
VAL 110.0264
THR 120.0543
ILE 130.0878
LYS 140.1312
ILE 150.1978
GLY 160.1397
GLY 170.2999
GLN 180.1522
LEU 190.0588
LYS 200.0427
GLU 210.0428
ALA 220.0745
LEU 230.0682
LEU 240.0192
ASP 250.0777
THR 260.1429
GLY 270.1830
ALA 280.0777
ASP 290.0246
ASP 300.0366
THR 310.0423
VAL 320.0360
LEU 330.0327
GLU 340.0115
GLU 350.0214
MET 360.0316
SER 370.0978
LEU 380.0478
PRO 390.1411
GLY 400.0576
ARG 410.1310
TRP 420.0405
LYS 430.0302
PRO 440.0250
LYS 450.0147
MET 460.0116
ILE 470.0071
GLY 480.0073
GLY 490.0081
ILE 500.0072
GLY 510.0071
GLY 520.0086
PHE 530.0062
ILE 540.0071
LYS 550.0167
VAL 560.0195
ARG 570.0219
GLN 580.0134
TYR 590.0224
ASP 600.0793
GLN 610.1334
ILE 620.0827
LEU 630.0400
ILE 640.1374
GLU 650.0822
ILE 660.1230
CYS 670.3142
GLY 680.2382
HIS 690.0470
LYS 700.0170
ALA 710.0312
ILE 720.0772
GLY 730.0906
THR 740.0666
VAL 750.0152
LEU 760.0150
VAL 770.0113
GLY 780.0261
PRO 790.0517
THR 800.0548
PRO 810.0953
VAL 820.0619
ASN 830.0518
ILE 840.0438
ILE 850.0348
GLY 860.0239
ARG 870.0818
ASN 880.0878
LEU 890.1005
LEU 900.1341
THR 910.1459
GLN 920.0711
ILE 930.0341
GLY 940.1171
CYS 950.1938
THR 960.1509
LEU 970.1247
ASN 980.1634
PHE 990.1549

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.