CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2740
PRO 10.1036
GLN 20.0628
ILE 30.1470
THR 40.1991
LEU 50.0518
TRP 60.2740
GLN 70.2648
ARG 80.1912
PRO 90.1115
LEU 100.0559
VAL 110.0806
THR 120.0943
ILE 130.1344
LYS 140.0366
ILE 150.0608
GLY 160.1460
GLY 170.1129
GLN 180.1048
LEU 190.0706
LYS 200.0570
GLU 210.0567
ALA 220.0980
LEU 230.0323
LEU 240.0353
ASP 250.0819
THR 260.1168
GLY 270.1431
ALA 280.0956
ASP 290.0757
ASP 300.0666
THR 310.0629
VAL 320.0568
LEU 330.0639
GLU 340.0578
GLU 350.0780
MET 360.0633
SER 370.1904
LEU 380.0268
PRO 390.0263
GLY 400.1391
ARG 410.0481
TRP 420.1000
LYS 430.1633
PRO 440.0509
LYS 450.0485
MET 460.0445
ILE 470.0430
GLY 480.0610
GLY 490.0668
ILE 500.0690
GLY 510.0530
GLY 520.0519
PHE 530.0544
ILE 540.0528
LYS 550.0490
VAL 560.0372
ARG 570.0369
GLN 580.0558
TYR 590.0291
ASP 600.0883
GLN 610.0983
ILE 620.1083
LEU 630.0899
ILE 640.1288
GLU 650.0978
ILE 660.0900
CYS 670.1209
GLY 680.1805
HIS 690.1036
LYS 700.0906
ALA 710.0743
ILE 720.0644
GLY 730.0128
THR 740.0592
VAL 750.0804
LEU 760.0603
VAL 770.0433
GLY 780.0285
PRO 790.0289
THR 800.0481
PRO 810.0825
VAL 820.0592
ASN 830.0692
ILE 840.0594
ILE 850.0602
GLY 860.0607
ARG 870.0669
ASN 880.0556
LEU 890.0751
LEU 900.0776
THR 910.0939
GLN 920.0466
ILE 930.0347
GLY 940.0976
CYS 950.2183
THR 960.1359
LEU 970.1447
ASN 980.2064
PHE 990.1755

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.