CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 50  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2617
PRO 10.0529
GLN 20.0458
ILE 30.0542
THR 40.0122
LEU 50.0278
TRP 60.1667
GLN 70.2295
ARG 80.1685
PRO 90.1163
LEU 100.0818
VAL 110.0708
THR 120.0421
ILE 130.0695
LYS 140.0993
ILE 150.1099
GLY 160.0524
GLY 170.1993
GLN 180.0710
LEU 190.1272
LYS 200.0976
GLU 210.0874
ALA 220.0601
LEU 230.0131
LEU 240.0326
ASP 250.0540
THR 260.0612
GLY 270.1186
ALA 280.1115
ASP 290.1201
ASP 300.1192
THR 310.0801
VAL 320.0343
LEU 330.0700
GLU 340.0400
GLU 350.0912
MET 360.0974
SER 370.2332
LEU 380.1662
PRO 390.1453
GLY 400.0489
ARG 410.0903
TRP 420.0333
LYS 430.2434
PRO 440.0979
LYS 450.0418
MET 460.0843
ILE 470.0837
GLY 480.0227
GLY 490.0736
ILE 500.0154
GLY 510.0171
GLY 520.1146
PHE 530.0342
ILE 540.0644
LYS 550.0940
VAL 560.1106
ARG 570.0428
GLN 580.0575
TYR 590.1127
ASP 600.0646
GLN 610.0908
ILE 620.0735
LEU 630.1031
ILE 640.1210
GLU 650.0934
ILE 660.0482
CYS 670.1176
GLY 680.0474
HIS 690.0843
LYS 700.0824
ALA 710.0560
ILE 720.0542
GLY 730.0560
THR 740.0404
VAL 750.0995
LEU 760.0519
VAL 770.0946
GLY 780.0670
PRO 790.0891
THR 800.0684
PRO 810.0547
VAL 820.1250
ASN 830.0703
ILE 840.0458
ILE 850.0589
GLY 860.0733
ARG 870.0554
ASN 880.0673
LEU 890.0836
LEU 900.0797
THR 910.0896
GLN 920.0997
ILE 930.1223
GLY 940.2441
CYS 950.1148
THR 960.2617
LEU 970.1029
ASN 980.1015
PHE 990.0430

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.