CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2778
PRO 10.0176
GLN 20.0236
ILE 30.0326
THR 40.0154
LEU 50.0491
TRP 60.0774
GLN 70.0742
ARG 80.0721
PRO 90.0599
LEU 100.0207
VAL 110.0343
THR 120.0304
ILE 130.0167
LYS 140.0226
ILE 150.0801
GLY 160.1042
GLY 170.0416
GLN 180.0453
LEU 190.0108
LYS 200.1008
GLU 210.0448
ALA 220.0331
LEU 230.0368
LEU 240.0428
ASP 250.0400
THR 260.0728
GLY 270.1271
ALA 280.0115
ASP 290.0226
ASP 300.0336
THR 310.0461
VAL 320.0396
LEU 330.1024
GLU 340.1208
GLU 350.1773
MET 360.2485
SER 370.1866
LEU 380.0315
PRO 390.2396
GLY 400.2623
ARG 410.2333
TRP 420.1133
LYS 430.0860
PRO 440.0399
LYS 450.1182
MET 460.0965
ILE 470.1550
GLY 480.0447
GLY 490.2084
ILE 500.0990
GLY 510.1085
GLY 520.1788
PHE 530.1079
ILE 540.1116
LYS 550.1028
VAL 560.1185
ARG 570.0483
GLN 580.0871
TYR 590.0776
ASP 600.1411
GLN 610.1849
ILE 620.1703
LEU 630.0780
ILE 640.0439
GLU 650.0346
ILE 660.0300
CYS 670.0631
GLY 680.0806
HIS 690.0816
LYS 700.0661
ALA 710.0591
ILE 720.1038
GLY 730.0909
THR 740.0656
VAL 750.0397
LEU 760.0725
VAL 770.0876
GLY 780.0958
PRO 790.0702
THR 800.0467
PRO 810.0695
VAL 820.2778
ASN 830.1554
ILE 840.0556
ILE 850.0431
GLY 860.0397
ARG 870.0508
ASN 880.0366
LEU 890.0467
LEU 900.0882
THR 910.0444
GLN 920.0271
ILE 930.0287
GLY 940.0745
CYS 950.1165
THR 960.0978
LEU 970.0559
ASN 980.0381
PHE 990.0498

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.