CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2613
PRO 10.0211
GLN 20.0306
ILE 30.0312
THR 40.0263
LEU 50.0406
TRP 60.0922
GLN 70.1861
ARG 80.2613
PRO 90.0603
LEU 100.1892
VAL 110.0642
THR 120.0409
ILE 130.0558
LYS 140.1701
ILE 150.2306
GLY 160.0454
GLY 170.2353
GLN 180.0457
LEU 190.2027
LYS 200.1022
GLU 210.0431
ALA 220.0374
LEU 230.0471
LEU 240.1028
ASP 250.1081
THR 260.0795
GLY 270.1074
ALA 280.0488
ASP 290.0066
ASP 300.0286
THR 310.0206
VAL 320.0577
LEU 330.0735
GLU 340.0638
GLU 350.1722
MET 360.1475
SER 370.2159
LEU 380.0928
PRO 390.1528
GLY 400.1225
ARG 410.1264
TRP 420.0223
LYS 430.0629
PRO 440.1200
LYS 450.0514
MET 460.0497
ILE 470.0686
GLY 480.0140
GLY 490.0245
ILE 500.0130
GLY 510.0097
GLY 520.0542
PHE 530.0213
ILE 540.0134
LYS 550.0360
VAL 560.0319
ARG 570.0641
GLN 580.0565
TYR 590.0365
ASP 600.0882
GLN 610.1236
ILE 620.1042
LEU 630.0443
ILE 640.1169
GLU 650.1785
ILE 660.0631
CYS 670.0525
GLY 680.1524
HIS 690.0468
LYS 700.0304
ALA 710.0747
ILE 720.1308
GLY 730.1833
THR 740.1030
VAL 750.0899
LEU 760.0786
VAL 770.1392
GLY 780.1691
PRO 790.1575
THR 800.1285
PRO 810.1210
VAL 820.0588
ASN 830.0413
ILE 840.0490
ILE 850.0637
GLY 860.0384
ARG 870.0521
ASN 880.0620
LEU 890.0985
LEU 900.0946
THR 910.0951
GLN 920.0504
ILE 930.0299
GLY 940.0804
CYS 950.1139
THR 960.0591
LEU 970.0299
ASN 980.0193
PHE 990.0255

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.