CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2818
PRO 10.0692
GLN 20.1134
ILE 30.1176
THR 40.0196
LEU 50.1146
TRP 60.1287
GLN 70.1060
ARG 80.0999
PRO 90.1656
LEU 100.0745
VAL 110.0419
THR 120.0273
ILE 130.0852
LYS 140.0466
ILE 150.0405
GLY 160.0473
GLY 170.0945
GLN 180.0639
LEU 190.0415
LYS 200.0428
GLU 210.0491
ALA 220.0192
LEU 230.0366
LEU 240.1147
ASP 250.1474
THR 260.0544
GLY 270.1496
ALA 280.0483
ASP 290.0663
ASP 300.0458
THR 310.0354
VAL 320.0496
LEU 330.0809
GLU 340.0629
GLU 350.1105
MET 360.1161
SER 370.2144
LEU 380.0960
PRO 390.0907
GLY 400.1139
ARG 410.0687
TRP 420.1186
LYS 430.2218
PRO 440.1944
LYS 450.0451
MET 460.1325
ILE 470.0730
GLY 480.0562
GLY 490.0993
ILE 500.0170
GLY 510.0223
GLY 520.1578
PHE 530.1091
ILE 540.0876
LYS 550.0646
VAL 560.0439
ARG 570.0595
GLN 580.0259
TYR 590.0379
ASP 600.2818
GLN 610.2729
ILE 620.1560
LEU 630.0503
ILE 640.0755
GLU 650.2048
ILE 660.1160
CYS 670.0579
GLY 680.1434
HIS 690.0924
LYS 700.0973
ALA 710.0883
ILE 720.0499
GLY 730.1120
THR 740.1137
VAL 750.1087
LEU 760.0324
VAL 770.0623
GLY 780.0589
PRO 790.0649
THR 800.0851
PRO 810.0616
VAL 820.0923
ASN 830.0704
ILE 840.0250
ILE 850.0529
GLY 860.0405
ARG 870.0516
ASN 880.0489
LEU 890.0238
LEU 900.0926
THR 910.1423
GLN 920.0788
ILE 930.0889
GLY 940.0491
CYS 950.1508
THR 960.0918
LEU 970.0405
ASN 980.0577
PHE 990.0334

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.