CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2887
PRO 10.0959
GLN 20.1563
ILE 30.1517
THR 40.0412
LEU 50.1604
TRP 60.1750
GLN 70.2129
ARG 80.2887
PRO 90.1601
LEU 100.1159
VAL 110.0648
THR 120.0234
ILE 130.1782
LYS 140.0994
ILE 150.0979
GLY 160.0842
GLY 170.1231
GLN 180.1209
LEU 190.1298
LYS 200.1989
GLU 210.0653
ALA 220.0381
LEU 230.0654
LEU 240.0252
ASP 250.0635
THR 260.0794
GLY 270.1913
ALA 280.0287
ASP 290.0744
ASP 300.0401
THR 310.0250
VAL 320.0267
LEU 330.0314
GLU 340.0386
GLU 350.1032
MET 360.0693
SER 370.1725
LEU 380.0354
PRO 390.0831
GLY 400.0690
ARG 410.0947
TRP 420.0864
LYS 430.1763
PRO 440.1701
LYS 450.0471
MET 460.0935
ILE 470.0496
GLY 480.0395
GLY 490.0639
ILE 500.0107
GLY 510.0157
GLY 520.1209
PHE 530.0802
ILE 540.0617
LYS 550.0426
VAL 560.0259
ARG 570.0305
GLN 580.0292
TYR 590.0376
ASP 600.0779
GLN 610.0853
ILE 620.0693
LEU 630.1393
ILE 640.1882
GLU 650.1020
ILE 660.1015
CYS 670.0506
GLY 680.2453
HIS 690.1127
LYS 700.1014
ALA 710.0820
ILE 720.0759
GLY 730.0858
THR 740.0988
VAL 750.0651
LEU 760.0103
VAL 770.0312
GLY 780.0411
PRO 790.0295
THR 800.0487
PRO 810.0473
VAL 820.0264
ASN 830.0159
ILE 840.0196
ILE 850.0212
GLY 860.0350
ARG 870.0864
ASN 880.0484
LEU 890.0438
LEU 900.0419
THR 910.1172
GLN 920.1212
ILE 930.0607
GLY 940.0537
CYS 950.1383
THR 960.1308
LEU 970.0538
ASN 980.0314
PHE 990.0367

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.