CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 57  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3853
PRO 10.0788
GLN 20.1432
ILE 30.1411
THR 40.0428
LEU 50.1737
TRP 60.1976
GLN 70.1894
ARG 80.2216
PRO 90.1335
LEU 100.1671
VAL 110.0739
THR 120.0299
ILE 130.0985
LYS 140.0893
ILE 150.1558
GLY 160.1387
GLY 170.0765
GLN 180.1034
LEU 190.1753
LYS 200.3853
GLU 210.0487
ALA 220.0815
LEU 230.0434
LEU 240.0116
ASP 250.0749
THR 260.0830
GLY 270.1733
ALA 280.0683
ASP 290.0650
ASP 300.0179
THR 310.0325
VAL 320.0821
LEU 330.0629
GLU 340.0321
GLU 350.0698
MET 360.0674
SER 370.0877
LEU 380.0313
PRO 390.0562
GLY 400.0925
ARG 410.0651
TRP 420.0528
LYS 430.0436
PRO 440.0737
LYS 450.0627
MET 460.0394
ILE 470.0921
GLY 480.0699
GLY 490.0234
ILE 500.0413
GLY 510.0501
GLY 520.1378
PHE 530.0569
ILE 540.0963
LYS 550.0247
VAL 560.0472
ARG 570.0522
GLN 580.0902
TYR 590.0464
ASP 600.0859
GLN 610.0356
ILE 620.0312
LEU 630.1263
ILE 640.2332
GLU 650.0884
ILE 660.1010
CYS 670.0953
GLY 680.2003
HIS 690.0701
LYS 700.0652
ALA 710.0606
ILE 720.0715
GLY 730.1131
THR 740.0357
VAL 750.0397
LEU 760.0539
VAL 770.0673
GLY 780.0177
PRO 790.0682
THR 800.0631
PRO 810.0534
VAL 820.0675
ASN 830.0605
ILE 840.0365
ILE 850.0479
GLY 860.0333
ARG 870.0727
ASN 880.0576
LEU 890.1160
LEU 900.1076
THR 910.1389
GLN 920.0958
ILE 930.0462
GLY 940.0689
CYS 950.1237
THR 960.0136
LEU 970.0091
ASN 980.0061
PHE 990.0066

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.