CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 59  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3221
PRO 10.0290
GLN 20.0347
ILE 30.0089
THR 40.0331
LEU 50.0185
TRP 60.0446
GLN 70.0777
ARG 80.1536
PRO 90.1089
LEU 100.0924
VAL 110.0204
THR 120.0351
ILE 130.0524
LYS 140.0662
ILE 150.0820
GLY 160.0368
GLY 170.0545
GLN 180.0393
LEU 190.0652
LYS 200.0554
GLU 210.0255
ALA 220.0544
LEU 230.0435
LEU 240.0839
ASP 250.0446
THR 260.0721
GLY 270.2523
ALA 280.0472
ASP 290.1408
ASP 300.0869
THR 310.1057
VAL 320.0626
LEU 330.0328
GLU 340.0526
GLU 350.1134
MET 360.0943
SER 370.0351
LEU 380.0218
PRO 390.0256
GLY 400.0447
ARG 410.0696
TRP 420.1100
LYS 430.0757
PRO 440.0635
LYS 450.0793
MET 460.2116
ILE 470.2472
GLY 480.3221
GLY 490.2735
ILE 500.1661
GLY 510.1209
GLY 520.1742
PHE 530.2441
ILE 540.2715
LYS 550.0667
VAL 560.0798
ARG 570.0525
GLN 580.0576
TYR 590.0497
ASP 600.0398
GLN 610.0614
ILE 620.0657
LEU 630.0170
ILE 640.0768
GLU 650.1201
ILE 660.0490
CYS 670.0817
GLY 680.1699
HIS 690.0896
LYS 700.0456
ALA 710.0556
ILE 720.0338
GLY 730.0572
THR 740.0313
VAL 750.0835
LEU 760.0329
VAL 770.0769
GLY 780.1155
PRO 790.0732
THR 800.0505
PRO 810.0650
VAL 820.1884
ASN 830.0516
ILE 840.0755
ILE 850.0652
GLY 860.0378
ARG 870.0647
ASN 880.0448
LEU 890.0181
LEU 900.0279
THR 910.0934
GLN 920.0761
ILE 930.0518
GLY 940.0473
CYS 950.0900
THR 960.0555
LEU 970.0272
ASN 980.0225
PHE 990.0056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.