CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2518
PRO 10.1016
GLN 20.1286
ILE 30.0233
THR 40.0314
LEU 50.0325
TRP 60.0454
GLN 70.0663
ARG 80.0919
PRO 90.1100
LEU 100.2476
VAL 110.0684
THR 120.0578
ILE 130.0877
LYS 140.1133
ILE 150.1397
GLY 160.0776
GLY 170.0908
GLN 180.0640
LEU 190.0928
LYS 200.0768
GLU 210.1110
ALA 220.1175
LEU 230.0640
LEU 240.0271
ASP 250.1097
THR 260.0481
GLY 270.1415
ALA 280.0324
ASP 290.0395
ASP 300.0343
THR 310.0633
VAL 320.0403
LEU 330.0259
GLU 340.0292
GLU 350.0999
MET 360.0563
SER 370.0386
LEU 380.0890
PRO 390.0527
GLY 400.0959
ARG 410.0817
TRP 420.1669
LYS 430.1371
PRO 440.0465
LYS 450.0384
MET 460.0386
ILE 470.1207
GLY 480.0763
GLY 490.0785
ILE 500.0804
GLY 510.0589
GLY 520.0481
PHE 530.0535
ILE 540.0474
LYS 550.0409
VAL 560.0227
ARG 570.1218
GLN 580.1476
TYR 590.0668
ASP 600.0288
GLN 610.0751
ILE 620.0912
LEU 630.0424
ILE 640.0214
GLU 650.1063
ILE 660.0506
CYS 670.1484
GLY 680.2518
HIS 690.1233
LYS 700.0641
ALA 710.0363
ILE 720.0792
GLY 730.0903
THR 740.1043
VAL 750.1054
LEU 760.0524
VAL 770.0544
GLY 780.0478
PRO 790.0309
THR 800.0319
PRO 810.0675
VAL 820.2175
ASN 830.0482
ILE 840.0652
ILE 850.0339
GLY 860.0444
ARG 870.0366
ASN 880.0340
LEU 890.0905
LEU 900.0272
THR 910.1283
GLN 920.1385
ILE 930.1638
GLY 940.0118
CYS 950.2150
THR 960.1942
LEU 970.2291
ASN 980.2360
PHE 990.1840

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.