CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

CA strain for 2604200934113787483

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 -0.0000
GLN 2ILE 3 0.0000
ILE 3THR 4 0.0000
THR 4LEU 5 0.0001
LEU 5TRP 6 -0.0003
TRP 6GLN 7 0.0001
GLN 7ARG 8 -0.0002
ARG 8PRO 9 0.0005
PRO 9LEU 10 -0.0001
LEU 10VAL 11 -0.0001
VAL 11THR 12 0.0004
THR 12ILE 13 -0.0001
ILE 13LYS 14 0.0003
LYS 14ILE 15 0.0002
ILE 15GLY 16 -0.0003
GLY 16GLY 17 0.0002
GLY 17GLN 18 -0.0001
GLN 18LEU 19 0.0002
LEU 19LYS 20 0.0004
LYS 20GLU 21 -0.0002
GLU 21ALA 22 -0.0003
ALA 22LEU 23 0.0001
LEU 23LEU 24 0.0001
LEU 24ASP 25 -0.0002
ASP 25THR 26 0.0004
THR 26GLY 27 0.0003
GLY 27ALA 28 -0.0002
ALA 28ASP 29 -0.0003
ASP 29ASP 30 -0.0001
ASP 30THR 31 0.0001
THR 31VAL 32 0.0003
VAL 32LEU 33 -0.0003
LEU 33GLU 34 0.0002
GLU 34GLU 35 -0.0002
GLU 35MET 36 -0.0004
MET 36SER 37 0.0000
SER 37LEU 38 0.0000
LEU 38PRO 39 -0.0003
PRO 39GLY 40 0.0002
GLY 40ARG 41 -0.0003
ARG 41TRP 42 0.0002
TRP 42LYS 43 0.0002
LYS 43PRO 44 0.0000
PRO 44LYS 45 -0.0001
LYS 45MET 46 0.0002
MET 46ILE 47 -0.0001
ILE 47GLY 48 -0.0000
GLY 48GLY 49 0.0002
GLY 49ILE 50 0.0001
ILE 50GLY 51 -0.0001
GLY 51GLY 52 0.0001
GLY 52PHE 53 -0.0002
PHE 53ILE 54 0.0000
ILE 54LYS 55 0.0004
LYS 55VAL 56 0.0000
VAL 56ARG 57 -0.0004
ARG 57GLN 58 0.0002
GLN 58TYR 59 -0.0002
TYR 59ASP 60 0.0004
ASP 60GLN 61 -0.0000
GLN 61ILE 62 -0.0001
ILE 62LEU 63 -0.0001
LEU 63ILE 64 -0.0001
ILE 64GLU 65 0.0003
GLU 65ILE 66 -0.0001
ILE 66CYS 67 0.0002
CYS 67GLY 68 0.0000
GLY 68HIS 69 0.0000
HIS 69LYS 70 -0.0002
LYS 70ALA 71 0.0004
ALA 71ILE 72 -0.0002
ILE 72GLY 73 -0.0002
GLY 73THR 74 -0.0002
THR 74VAL 75 0.0000
VAL 75LEU 76 0.0005
LEU 76VAL 77 0.0003
VAL 77GLY 78 -0.0001
GLY 78PRO 79 -0.0003
PRO 79THR 80 -0.0000
THR 80PRO 81 0.0004
PRO 81VAL 82 -0.0004
VAL 82ASN 83 0.0004
ASN 83ILE 84 0.0003
ILE 84ILE 85 -0.0001
ILE 85GLY 86 -0.0002
GLY 86ARG 87 0.0006
ARG 87ASN 88 0.0002
ASN 88LEU 89 -0.0003
LEU 89LEU 90 0.0004
LEU 90THR 91 -0.0001
THR 91GLN 92 -0.0003
GLN 92ILE 93 0.0002
ILE 93GLY 94 0.0001
GLY 94CYS 95 -0.0002
CYS 95THR 96 0.0001
THR 96LEU 97 -0.0001
LEU 97ASN 98 -0.0001

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.