CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

CA distance fluctuations for 2604200934113787483

---  normal mode 7  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
THR 12 0.25 PRO 1 -1.44 THR 96
GLN 7 0.14 GLN 2 -1.67 THR 96
ASN 98 0.49 ILE 3 -0.28 THR 96
ASN 98 0.35 THR 4 -0.20 THR 96
ASN 98 0.18 LEU 5 -0.13 GLN 2
PRO 1 0.14 TRP 6 -0.09 THR 96
PRO 1 0.21 GLN 7 -0.07 THR 96
ASN 98 0.13 ARG 8 -0.04 LEU 97
ASN 98 0.21 PRO 9 -0.09 GLN 2
ASN 98 0.20 LEU 10 -0.05 THR 96
ASN 98 0.23 VAL 11 -0.08 THR 96
PRO 1 0.25 THR 12 -0.07 THR 96
ASN 98 0.20 ILE 13 -0.03 GLN 2
ASN 98 0.18 LYS 14 -0.02 THR 96
ASN 98 0.15 ILE 15 -0.08 GLN 2
ASN 98 0.13 GLY 16 -0.05 GLN 2
ASN 98 0.14 GLY 17 -0.01 GLN 7
ASN 98 0.14 GLN 18 -0.01 GLN 7
PRO 1 0.18 LEU 19 -0.02 THR 96
ASN 98 0.15 LYS 20 -0.02 GLN 7
PRO 1 0.17 GLU 21 -0.02 GLN 7
ASN 98 0.16 ALA 22 -0.11 GLN 2
ASN 98 0.16 LEU 23 -0.21 GLN 2
ASN 98 0.20 LEU 24 -0.43 GLN 2
THR 96 0.20 ASP 25 -0.49 GLN 2
THR 96 0.37 THR 26 -0.67 GLN 2
THR 96 0.31 GLY 27 -0.53 GLN 2
THR 96 0.28 ALA 28 -0.46 GLN 2
THR 96 0.33 ASP 29 -0.48 GLN 2
THR 96 0.25 ASP 30 -0.40 GLN 2
THR 96 0.19 THR 31 -0.34 GLN 2
THR 96 0.14 VAL 32 -0.25 GLN 2
ASN 98 0.10 LEU 33 -0.17 GLN 2
ASN 98 0.10 GLU 34 -0.10 GLN 2
ASN 98 0.09 GLU 35 -0.09 GLN 2
ASN 98 0.10 MET 36 -0.07 GLN 2
ASN 98 0.10 SER 37 -0.07 GLN 2
ASN 98 0.10 LEU 38 -0.11 GLN 2
ASN 98 0.09 PRO 39 -0.11 GLN 2
ASN 98 0.08 GLY 40 -0.15 GLN 2
THR 96 0.10 ARG 41 -0.17 GLN 2
THR 96 0.11 TRP 42 -0.19 GLN 2
THR 96 0.13 LYS 43 -0.21 GLN 2
THR 96 0.13 PRO 44 -0.21 GLN 2
THR 96 0.15 LYS 45 -0.24 GLN 2
THR 96 0.15 MET 46 -0.23 GLN 2
THR 96 0.17 ILE 47 -0.25 GLN 2
THR 96 0.16 GLY 48 -0.24 GLN 2
THR 96 0.14 GLY 49 -0.21 GLN 2
THR 96 0.12 ILE 50 -0.18 GLN 2
THR 96 0.11 GLY 51 -0.16 GLN 2
THR 96 0.12 GLY 52 -0.18 GLN 2
THR 96 0.14 PHE 53 -0.20 GLN 2
THR 96 0.12 ILE 54 -0.18 GLN 2
THR 96 0.13 LYS 55 -0.18 GLN 2
THR 96 0.13 VAL 56 -0.19 GLN 2
THR 96 0.12 ARG 57 -0.19 GLN 2
THR 96 0.14 GLN 58 -0.23 GLN 2
THR 96 0.13 TYR 59 -0.22 GLN 2
THR 96 0.14 ASP 60 -0.27 PRO 1
THR 96 0.12 GLN 61 -0.28 PRO 1
ASN 98 0.12 ILE 62 -0.23 PRO 1
ASN 98 0.14 LEU 63 -0.22 PRO 1
ASN 98 0.17 ILE 64 -0.19 PRO 1
ASN 98 0.20 GLU 65 -0.13 PRO 1
ASN 98 0.24 ILE 66 -0.17 PRO 1
ASN 98 0.28 CYS 67 -0.14 THR 96
ASN 98 0.25 GLY 68 -0.13 THR 96
ASN 98 0.25 HIS 69 -0.30 PRO 1
ASN 98 0.20 LYS 70 -0.29 PRO 1
ASN 98 0.18 ALA 71 -0.41 PRO 1
ASN 98 0.14 ILE 72 -0.37 PRO 1
THR 96 0.16 GLY 73 -0.37 PRO 1
THR 96 0.17 THR 74 -0.31 PRO 1
THR 96 0.15 VAL 75 -0.27 GLN 2
THR 96 0.15 LEU 76 -0.24 GLN 2
THR 96 0.11 VAL 77 -0.17 GLN 2
THR 96 0.10 GLY 78 -0.15 GLN 2
THR 96 0.09 PRO 79 -0.12 GLN 2
THR 96 0.10 THR 80 -0.14 GLN 2
THR 96 0.08 PRO 81 -0.10 GLN 2
ASN 98 0.09 VAL 82 -0.12 GLN 2
ASN 98 0.11 ASN 83 -0.15 GLN 2
THR 96 0.13 ILE 84 -0.27 GLN 2
THR 96 0.15 ILE 85 -0.37 GLN 2
THR 96 0.27 GLY 86 -0.49 GLN 2
THR 96 0.42 ARG 87 -0.61 GLN 2
THR 96 0.32 ASN 88 -0.52 PRO 1
THR 96 0.23 LEU 89 -0.54 PRO 1
THR 96 0.29 LEU 90 -0.72 PRO 1
THR 96 0.39 THR 91 -0.80 PRO 1
ASN 98 0.18 GLN 92 -0.71 PRO 1
ASN 98 0.26 ILE 93 -0.81 PRO 1
ASN 98 0.29 GLY 94 -1.14 PRO 1
ASN 98 0.37 CYS 95 -1.24 PRO 1
ARG 87 0.42 THR 96 -1.67 GLN 2
THR 26 0.10 LEU 97 -1.33 GLN 2
ILE 3 0.49 ASN 98 -0.55 GLN 2

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.