CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

CA distance fluctuations for 2604200934113787483

---  normal mode 8  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
LEU 97 0.29 PRO 1 -0.15 CYS 67
LEU 97 0.58 GLN 2 -0.07 THR 12
LEU 97 0.20 ILE 3 -0.33 ASN 98
LEU 97 0.20 THR 4 -0.44 ASN 98
LEU 97 0.09 LEU 5 -0.49 ASN 98
LEU 97 0.09 TRP 6 -0.37 ASN 98
LEU 97 0.05 GLN 7 -0.33 ASN 98
GLN 2 0.01 ARG 8 -0.34 ASN 98
GLN 2 0.03 PRO 9 -0.35 ASN 98
VAL 11 0.00 LEU 10 -0.26 ASN 98
LEU 97 0.01 VAL 11 -0.20 ASN 98
LEU 97 0.01 THR 12 -0.14 ASN 98
LYS 14 0.00 ILE 13 -0.11 ASN 98
ILE 13 0.00 LYS 14 -0.08 PRO 1
THR 96 0.01 ILE 15 -0.06 ASN 98
THR 96 0.01 GLY 16 -0.05 ASN 98
ILE 13 0.00 GLY 17 -0.07 PRO 1
THR 96 0.00 GLN 18 -0.08 ASN 98
ILE 15 0.00 LEU 19 -0.10 ASN 98
GLU 21 0.00 LYS 20 -0.12 ASN 98
LYS 20 0.00 GLU 21 -0.16 ASN 98
GLN 2 0.02 ALA 22 -0.18 ASN 98
GLN 2 0.06 LEU 23 -0.23 ASN 98
GLN 2 0.15 LEU 24 -0.24 ASN 98
GLN 2 0.17 ASP 25 -0.24 ASN 98
THR 96 0.23 THR 26 -0.20 ASN 98
THR 96 0.19 GLY 27 -0.18 ASN 98
THR 96 0.17 ALA 28 -0.13 ASN 98
THR 96 0.20 ASP 29 -0.10 LEU 97
THR 96 0.15 ASP 30 -0.08 LEU 97
THR 96 0.11 THR 31 -0.09 ASN 98
THR 96 0.09 VAL 32 -0.10 ASN 98
THR 96 0.06 LEU 33 -0.11 ASN 98
THR 96 0.04 GLU 34 -0.11 ASN 98
THR 96 0.04 GLU 35 -0.09 ASN 98
THR 96 0.03 MET 36 -0.08 ASN 98
THR 96 0.03 SER 37 -0.06 ASN 98
THR 96 0.04 LEU 38 -0.04 ASN 98
THR 96 0.04 PRO 39 -0.03 ASN 98
THR 96 0.05 GLY 40 -0.02 LEU 97
THR 96 0.06 ARG 41 -0.03 LEU 97
THR 96 0.07 TRP 42 -0.03 LEU 97
THR 96 0.08 LYS 43 -0.04 LEU 97
THR 96 0.08 PRO 44 -0.04 LEU 97
THR 96 0.09 LYS 45 -0.05 LEU 97
THR 96 0.09 MET 46 -0.06 ASN 98
THR 96 0.10 ILE 47 -0.08 ASN 98
THR 96 0.10 GLY 48 -0.10 ASN 98
THR 96 0.08 GLY 49 -0.12 ASN 98
THR 96 0.07 ILE 50 -0.13 ASN 98
THR 96 0.06 GLY 51 -0.12 ASN 98
THR 96 0.07 GLY 52 -0.10 ASN 98
THR 96 0.08 PHE 53 -0.09 ASN 98
THR 96 0.07 ILE 54 -0.09 ASN 98
THR 96 0.08 LYS 55 -0.07 ASN 98
THR 96 0.08 VAL 56 -0.07 ASN 98
THR 96 0.07 ARG 57 -0.05 ASN 98
THR 96 0.09 GLN 58 -0.04 LEU 97
THR 96 0.08 TYR 59 -0.04 LEU 97
THR 96 0.09 ASP 60 -0.04 LEU 97
GLN 2 0.08 GLN 61 -0.03 LEU 97
GLN 2 0.06 ILE 62 -0.03 LEU 97
GLN 2 0.05 LEU 63 -0.02 LEU 97
GLN 2 0.04 ILE 64 -0.03 ASN 98
GLN 2 0.02 GLU 65 -0.05 PRO 1
GLN 2 0.04 ILE 66 -0.07 ASN 98
LEU 97 0.03 CYS 67 -0.15 PRO 1
LEU 97 0.02 GLY 68 -0.12 PRO 1
GLN 2 0.04 HIS 69 -0.06 THR 96
GLN 2 0.05 LYS 70 -0.01 THR 96
GLN 2 0.09 ALA 71 -0.01 LEU 97
GLN 2 0.09 ILE 72 -0.02 LEU 97
GLN 2 0.10 GLY 73 -0.04 LEU 97
THR 96 0.10 THR 74 -0.04 LEU 97
THR 96 0.09 VAL 75 -0.05 ASN 98
THR 96 0.09 LEU 76 -0.06 ASN 98
THR 96 0.07 VAL 77 -0.08 ASN 98
THR 96 0.06 GLY 78 -0.09 ASN 98
THR 96 0.05 PRO 79 -0.11 ASN 98
THR 96 0.06 THR 80 -0.13 ASN 98
THR 96 0.05 PRO 81 -0.15 ASN 98
THR 96 0.05 VAL 82 -0.17 ASN 98
THR 96 0.05 ASN 83 -0.15 ASN 98
GLN 2 0.08 ILE 84 -0.16 ASN 98
GLN 2 0.12 ILE 85 -0.13 ASN 98
THR 96 0.17 GLY 86 -0.11 ASN 98
THR 96 0.26 ARG 87 -0.11 LEU 97
THR 96 0.20 ASN 88 -0.08 LEU 97
GLN 2 0.16 LEU 89 -0.05 LEU 97
GLN 2 0.23 LEU 90 -0.06 LEU 97
THR 96 0.25 THR 91 -0.06 LEU 97
GLN 2 0.18 GLN 92 -0.03 LEU 97
GLN 2 0.19 ILE 93 -0.00 LEU 97
GLN 2 0.27 GLY 94 -0.00 GLN 92
GLN 2 0.39 CYS 95 -0.00 THR 91
ARG 87 0.26 THR 96 -0.13 ILE 3
GLN 2 0.58 LEU 97 -0.16 THR 26
GLY 94 0.16 ASN 98 -0.49 LEU 5

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.