CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2390
PRO 10.0356
GLN 20.0713
ILE 30.0692
THR 40.1116
LEU 50.1634
TRP 60.1197
GLN 70.0640
ARG 80.1312
PRO 90.1550
LEU 100.1317
VAL 110.0354
THR 120.0374
ILE 130.0857
LYS 140.1216
ILE 150.0832
GLY 160.0716
GLY 170.1125
GLN 180.1299
LEU 190.1351
LYS 200.1515
GLU 210.2390
ALA 220.1442
LEU 230.0623
LEU 240.1332
ASP 250.2198
THR 260.2141
GLY 270.2027
ALA 280.1311
ASP 290.1849
ASP 300.0739
THR 310.1206
VAL 320.0445
LEU 330.0622
GLU 340.0657
GLU 350.1278
MET 360.0993
SER 370.1015
LEU 380.1387
PRO 390.0430
GLY 400.0713
ARG 410.0480
TRP 420.1192
LYS 430.1168
PRO 440.0663
LYS 450.0684
MET 460.0742
ILE 470.0178
GLY 480.0494
GLY 490.0677
ILE 500.0483
GLY 510.0531
GLY 520.0642
PHE 530.0302
ILE 540.0492
LYS 550.0370
VAL 560.0219
ARG 570.0426
GLN 580.0476
TYR 590.0748
ASP 600.1197
GLN 610.0652
ILE 620.1046
LEU 630.0845
ILE 640.0411
GLU 650.1798
ILE 660.0917
CYS 670.1050
GLY 680.0454
HIS 690.0720
LYS 700.0492
ALA 710.0430
ILE 720.1021
GLY 730.1151
THR 740.0337
VAL 750.0925
LEU 760.0072
VAL 770.0330
GLY 780.0450
PRO 790.0698
THR 800.0479
PRO 810.0640
VAL 820.0790
ASN 830.1224
ILE 840.0375
ILE 850.0720
GLY 860.0324
ARG 870.0673
ASN 880.0287
LEU 890.0532
LEU 900.1117
THR 910.0894
GLN 920.1734
ILE 930.1032
GLY 940.1513
CYS 950.1812
THR 960.0454
LEU 970.0594
ASN 980.0278
PHE 990.0166

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.