CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3157
PRO 10.1582
GLN 20.1586
ILE 30.3143
THR 40.1521
LEU 50.1753
TRP 60.1468
GLN 70.0289
ARG 80.3157
PRO 90.1313
LEU 100.2216
VAL 110.1442
THR 120.1250
ILE 130.0542
LYS 140.1100
ILE 150.1424
GLY 160.1083
GLY 170.1087
GLN 180.1131
LEU 190.0766
LYS 200.1563
GLU 210.0685
ALA 220.0816
LEU 230.1157
LEU 240.0529
ASP 250.1054
THR 260.0945
GLY 270.0633
ALA 280.0477
ASP 290.0772
ASP 300.0391
THR 310.0478
VAL 320.1000
LEU 330.0576
GLU 340.0321
GLU 350.0680
MET 360.0629
SER 370.0463
LEU 380.1325
PRO 390.0364
GLY 400.1078
ARG 410.0490
TRP 420.0622
LYS 430.0595
PRO 440.0463
LYS 450.0631
MET 460.0474
ILE 470.0165
GLY 480.0645
GLY 490.0742
ILE 500.0471
GLY 510.0459
GLY 520.0457
PHE 530.0841
ILE 540.0615
LYS 550.0318
VAL 560.0096
ARG 570.0710
GLN 580.0844
TYR 590.0490
ASP 600.1187
GLN 610.1094
ILE 620.0868
LEU 630.0559
ILE 640.0430
GLU 650.1637
ILE 660.0540
CYS 670.0240
GLY 680.0391
HIS 690.0352
LYS 700.0593
ALA 710.1274
ILE 720.0541
GLY 730.0672
THR 740.0731
VAL 750.0378
LEU 760.0295
VAL 770.0217
GLY 780.0269
PRO 790.0257
THR 800.2906
PRO 810.1616
VAL 820.0426
ASN 830.0195
ILE 840.0957
ILE 850.0755
GLY 860.0484
ARG 870.0471
ASN 880.0506
LEU 890.1523
LEU 900.0449
THR 910.0888
GLN 920.0157
ILE 930.0609
GLY 940.0691
CYS 950.0685
THR 960.0237
LEU 970.0081
ASN 980.0043
PHE 990.0043

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.