CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 83  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2611
PRO 10.0651
GLN 20.0681
ILE 30.1462
THR 40.0683
LEU 50.0780
TRP 60.0544
GLN 70.0282
ARG 80.1481
PRO 90.0467
LEU 100.1529
VAL 110.1182
THR 120.0830
ILE 130.0786
LYS 140.0615
ILE 150.0958
GLY 160.1178
GLY 170.1668
GLN 180.0691
LEU 190.1268
LYS 200.1374
GLU 210.0993
ALA 220.0944
LEU 230.0585
LEU 240.1127
ASP 250.1129
THR 260.0910
GLY 270.0802
ALA 280.0525
ASP 290.0704
ASP 300.0838
THR 310.0745
VAL 320.1037
LEU 330.0552
GLU 340.0756
GLU 350.0605
MET 360.1718
SER 370.0464
LEU 380.0627
PRO 390.0419
GLY 400.0276
ARG 410.0523
TRP 420.0339
LYS 430.0756
PRO 440.1213
LYS 450.1333
MET 460.1435
ILE 470.0614
GLY 480.0389
GLY 490.0597
ILE 500.0582
GLY 510.0735
GLY 520.1128
PHE 530.1216
ILE 540.0518
LYS 550.1454
VAL 560.0752
ARG 570.0606
GLN 580.0466
TYR 590.0610
ASP 600.1532
GLN 610.2031
ILE 620.0694
LEU 630.1435
ILE 640.1247
GLU 650.2311
ILE 660.0881
CYS 670.1176
GLY 680.1407
HIS 690.1195
LYS 700.1207
ALA 710.1421
ILE 720.2103
GLY 730.2611
THR 740.0758
VAL 750.0516
LEU 760.0628
VAL 770.0717
GLY 780.0152
PRO 790.0182
THR 800.2251
PRO 810.1099
VAL 820.1017
ASN 830.0402
ILE 840.0361
ILE 850.0694
GLY 860.0664
ARG 870.0811
ASN 880.0460
LEU 890.0774
LEU 900.0322
THR 910.0103
GLN 920.0903
ILE 930.0420
GLY 940.0611
CYS 950.0229
THR 960.0113
LEU 970.0145
ASN 980.0069
PHE 990.0009

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.