CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2246
PRO 10.0096
GLN 20.0096
ILE 30.0173
THR 40.0080
LEU 50.0211
TRP 60.0211
GLN 70.0310
ARG 80.0539
PRO 90.0744
LEU 100.1227
VAL 110.0632
THR 120.0369
ILE 130.0151
LYS 140.1891
ILE 150.0807
GLY 160.0501
GLY 170.0966
GLN 180.1280
LEU 190.1023
LYS 200.0937
GLU 210.1085
ALA 220.0733
LEU 230.0513
LEU 240.0570
ASP 250.0492
THR 260.0473
GLY 270.0546
ALA 280.0447
ASP 290.0364
ASP 300.0233
THR 310.0587
VAL 320.1058
LEU 330.1022
GLU 340.0571
GLU 350.0572
MET 360.1314
SER 370.0875
LEU 380.2221
PRO 390.0960
GLY 400.1720
ARG 410.1303
TRP 420.1031
LYS 430.0986
PRO 440.2158
LYS 450.1674
MET 460.1545
ILE 470.0209
GLY 480.1806
GLY 490.1558
ILE 500.0519
GLY 510.0546
GLY 520.0888
PHE 530.2246
ILE 540.1209
LYS 550.0970
VAL 560.1221
ARG 570.0570
GLN 580.0148
TYR 590.0518
ASP 600.0870
GLN 610.1013
ILE 620.1213
LEU 630.1387
ILE 640.1258
GLU 650.0377
ILE 660.0401
CYS 670.1025
GLY 680.1050
HIS 690.0871
LYS 700.2083
ALA 710.1121
ILE 720.1174
GLY 730.0699
THR 740.1513
VAL 750.0446
LEU 760.0701
VAL 770.0354
GLY 780.0406
PRO 790.1073
THR 800.0727
PRO 810.0602
VAL 820.0989
ASN 830.0748
ILE 840.0767
ILE 850.0372
GLY 860.0196
ARG 870.0222
ASN 880.0369
LEU 890.0685
LEU 900.0220
THR 910.1265
GLN 920.0659
ILE 930.1447
GLY 940.0916
CYS 950.1060
THR 960.1394
LEU 970.2191
ASN 980.1003
PHE 990.0374

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.