CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3471
PRO 10.0302
GLN 20.0342
ILE 30.0543
THR 40.0159
LEU 50.0110
TRP 60.0090
GLN 70.0263
ARG 80.0826
PRO 90.1222
LEU 100.1481
VAL 110.1013
THR 120.0288
ILE 130.0819
LYS 140.1355
ILE 150.0219
GLY 160.0777
GLY 170.2254
GLN 180.2619
LEU 190.2292
LYS 200.1255
GLU 210.0635
ALA 220.0416
LEU 230.0427
LEU 240.1946
ASP 250.0269
THR 260.1485
GLY 270.1194
ALA 280.0344
ASP 290.0592
ASP 300.0599
THR 310.0399
VAL 320.0989
LEU 330.0940
GLU 340.0487
GLU 350.2232
MET 360.3471
SER 370.1318
LEU 380.1087
PRO 390.0967
GLY 400.0480
ARG 410.0242
TRP 420.0887
LYS 430.0408
PRO 440.0589
LYS 450.0429
MET 460.0953
ILE 470.0494
GLY 480.0766
GLY 490.0463
ILE 500.0250
GLY 510.0259
GLY 520.0170
PHE 530.0521
ILE 540.0302
LYS 550.0749
VAL 560.0431
ARG 570.0501
GLN 580.0936
TYR 590.0470
ASP 600.0800
GLN 610.0648
ILE 620.0478
LEU 630.0828
ILE 640.0863
GLU 650.1883
ILE 660.1034
CYS 670.0909
GLY 680.0829
HIS 690.1544
LYS 700.1281
ALA 710.1572
ILE 720.0792
GLY 730.0668
THR 740.0115
VAL 750.0944
LEU 760.0330
VAL 770.1168
GLY 780.1877
PRO 790.0822
THR 800.1115
PRO 810.1108
VAL 820.0800
ASN 830.1306
ILE 840.0926
ILE 850.0078
GLY 860.0118
ARG 870.0142
ASN 880.0412
LEU 890.0390
LEU 900.1134
THR 910.0522
GLN 920.0384
ILE 930.0444
GLY 940.0521
CYS 950.0837
THR 960.0630
LEU 970.0947
ASN 980.0431
PHE 990.0203

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.