CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3429
PRO 10.0718
GLN 20.0866
ILE 30.1178
THR 40.0519
LEU 50.0247
TRP 60.0203
GLN 70.0201
ARG 80.1921
PRO 90.2265
LEU 100.0729
VAL 110.0984
THR 120.1500
ILE 130.2462
LYS 140.0259
ILE 150.1653
GLY 160.0854
GLY 170.1216
GLN 180.1863
LEU 190.3429
LYS 200.3088
GLU 210.1405
ALA 220.0859
LEU 230.0253
LEU 240.0669
ASP 250.0219
THR 260.0518
GLY 270.1057
ALA 280.0471
ASP 290.1209
ASP 300.0820
THR 310.0600
VAL 320.0882
LEU 330.0855
GLU 340.0508
GLU 350.0920
MET 360.0459
SER 370.0761
LEU 380.2026
PRO 390.1652
GLY 400.0398
ARG 410.1192
TRP 420.0931
LYS 430.0884
PRO 440.0778
LYS 450.0828
MET 460.0792
ILE 470.0354
GLY 480.0749
GLY 490.0468
ILE 500.0276
GLY 510.0273
GLY 520.0267
PHE 530.0682
ILE 540.0361
LYS 550.0209
VAL 560.0433
ARG 570.0343
GLN 580.0218
TYR 590.1246
ASP 600.0557
GLN 610.0455
ILE 620.0965
LEU 630.1450
ILE 640.0345
GLU 650.1146
ILE 660.1070
CYS 670.0843
GLY 680.1025
HIS 690.1294
LYS 700.0414
ALA 710.0747
ILE 720.0664
GLY 730.0283
THR 740.0397
VAL 750.1047
LEU 760.0900
VAL 770.0613
GLY 780.0636
PRO 790.0666
THR 800.0601
PRO 810.0614
VAL 820.1020
ASN 830.0682
ILE 840.0525
ILE 850.0380
GLY 860.0363
ARG 870.0674
ASN 880.0416
LEU 890.0465
LEU 900.1173
THR 910.0891
GLN 920.1118
ILE 930.0471
GLY 940.0281
CYS 950.0421
THR 960.0231
LEU 970.0562
ASN 980.0251
PHE 990.0171

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.