CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2598
PRO 10.0306
GLN 20.0375
ILE 30.0596
THR 40.0124
LEU 50.0317
TRP 60.0135
GLN 70.0351
ARG 80.1153
PRO 90.0550
LEU 100.1568
VAL 110.1576
THR 120.0893
ILE 130.1314
LYS 140.1037
ILE 150.0651
GLY 160.0492
GLY 170.0504
GLN 180.1388
LEU 190.2200
LYS 200.2056
GLU 210.1091
ALA 220.1558
LEU 230.1720
LEU 240.1492
ASP 250.1149
THR 260.0902
GLY 270.0393
ALA 280.0876
ASP 290.0979
ASP 300.0507
THR 310.0219
VAL 320.1480
LEU 330.0800
GLU 340.0521
GLU 350.0458
MET 360.0307
SER 370.0153
LEU 380.0645
PRO 390.0296
GLY 400.0505
ARG 410.0346
TRP 420.1435
LYS 430.0892
PRO 440.0511
LYS 450.0482
MET 460.0370
ILE 470.0735
GLY 480.0719
GLY 490.0386
ILE 500.0645
GLY 510.0368
GLY 520.0507
PHE 530.0582
ILE 540.0555
LYS 550.1762
VAL 560.1470
ARG 570.0203
GLN 580.0822
TYR 590.0629
ASP 600.1141
GLN 610.0704
ILE 620.0603
LEU 630.1643
ILE 640.0557
GLU 650.2119
ILE 660.0996
CYS 670.0997
GLY 680.0639
HIS 690.1564
LYS 700.1032
ALA 710.2598
ILE 720.0590
GLY 730.0733
THR 740.1464
VAL 750.0627
LEU 760.0627
VAL 770.0495
GLY 780.0444
PRO 790.1119
THR 800.0671
PRO 810.0990
VAL 820.0591
ASN 830.0840
ILE 840.0841
ILE 850.0781
GLY 860.0475
ARG 870.0445
ASN 880.0771
LEU 890.0700
LEU 900.2341
THR 910.1658
GLN 920.0755
ILE 930.1914
GLY 940.0623
CYS 950.0299
THR 960.0410
LEU 970.0803
ASN 980.0373
PHE 990.0307

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.