CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 97  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2906
PRO 10.0167
GLN 20.0222
ILE 30.0201
THR 40.0100
LEU 50.0138
TRP 60.0053
GLN 70.0119
ARG 80.0748
PRO 90.0580
LEU 100.0966
VAL 110.1077
THR 120.0610
ILE 130.0254
LYS 140.0237
ILE 150.0184
GLY 160.0235
GLY 170.0617
GLN 180.0313
LEU 190.0394
LYS 200.0664
GLU 210.0795
ALA 220.0316
LEU 230.0288
LEU 240.1074
ASP 250.1427
THR 260.1107
GLY 270.0491
ALA 280.1135
ASP 290.0640
ASP 300.1333
THR 310.0830
VAL 320.1048
LEU 330.0489
GLU 340.0375
GLU 350.1297
MET 360.0846
SER 370.1868
LEU 380.2906
PRO 390.2000
GLY 400.0859
ARG 410.0995
TRP 420.1561
LYS 430.0820
PRO 440.1252
LYS 450.0577
MET 460.0697
ILE 470.0670
GLY 480.0297
GLY 490.0343
ILE 500.0278
GLY 510.0034
GLY 520.0171
PHE 530.0884
ILE 540.0684
LYS 550.2076
VAL 560.0698
ARG 570.1240
GLN 580.1036
TYR 590.0936
ASP 600.2448
GLN 610.2230
ILE 620.0220
LEU 630.0600
ILE 640.0287
GLU 650.0595
ILE 660.0720
CYS 670.0141
GLY 680.0434
HIS 690.1479
LYS 700.0532
ALA 710.0482
ILE 720.1109
GLY 730.0202
THR 740.2363
VAL 750.1444
LEU 760.1579
VAL 770.1205
GLY 780.1079
PRO 790.1412
THR 800.0111
PRO 810.1214
VAL 820.0475
ASN 830.0732
ILE 840.1980
ILE 850.1198
GLY 860.0625
ARG 870.0423
ASN 880.0668
LEU 890.1766
LEU 900.1270
THR 910.0932
GLN 920.1058
ILE 930.0626
GLY 940.0751
CYS 950.0632
THR 960.0204
LEU 970.0382
ASN 980.0184
PHE 990.0144

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.