CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff8_ca  ***

<R2> analysis for 2604200934113787483

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2585
PRO 10.0060
GLN 20.0073
ILE 30.0184
THR 40.0085
LEU 50.0129
TRP 60.0100
GLN 70.0200
ARG 80.0286
PRO 90.0254
LEU 100.0225
VAL 110.0705
THR 120.0386
ILE 130.0342
LYS 140.0215
ILE 150.0275
GLY 160.0107
GLY 170.0555
GLN 180.0273
LEU 190.0332
LYS 200.0292
GLU 210.0701
ALA 220.0336
LEU 230.0168
LEU 240.0415
ASP 250.1267
THR 260.0913
GLY 270.1287
ALA 280.0837
ASP 290.0917
ASP 300.0567
THR 310.0419
VAL 320.2447
LEU 330.1842
GLU 340.1383
GLU 350.1151
MET 360.1535
SER 370.1573
LEU 380.1396
PRO 390.1241
GLY 400.2520
ARG 410.0759
TRP 420.1448
LYS 430.0546
PRO 440.2585
LYS 450.2044
MET 460.2487
ILE 470.2169
GLY 480.0941
GLY 490.0682
ILE 500.0573
GLY 510.0485
GLY 520.0736
PHE 530.1055
ILE 540.1077
LYS 550.2313
VAL 560.1098
ARG 570.1331
GLN 580.0424
TYR 590.0654
ASP 600.0912
GLN 610.1083
ILE 620.0643
LEU 630.1546
ILE 640.0384
GLU 650.0466
ILE 660.0511
CYS 670.0333
GLY 680.0275
HIS 690.0835
LYS 700.0540
ALA 710.1467
ILE 720.0214
GLY 730.0403
THR 740.0296
VAL 750.0269
LEU 760.0266
VAL 770.1275
GLY 780.1308
PRO 790.2522
THR 800.1014
PRO 810.0775
VAL 820.0052
ASN 830.0614
ILE 840.0520
ILE 850.0412
GLY 860.0607
ARG 870.0578
ASN 880.0596
LEU 890.0598
LEU 900.0233
THR 910.0567
GLN 920.0923
ILE 930.0932
GLY 940.0339
CYS 950.0764
THR 960.0045
LEU 970.0175
ASN 980.0076
PHE 990.0094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.