CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA strain for 2604200934113787484

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 -0.0345
GLN 2ILE 3 0.2199
ILE 3THR 4 0.0810
THR 4LEU 5 -0.0996
LEU 5TRP 6 0.0064
TRP 6GLN 7 0.0382
GLN 7ARG 8 -0.0255
ARG 8PRO 9 -0.0148
PRO 9LEU 10 0.0407
LEU 10VAL 11 -0.0097
VAL 11THR 12 -0.1519
THR 12ILE 13 0.0084
ILE 13LYS 14 -0.0112
LYS 14ILE 15 -0.0020
ILE 15GLY 16 -0.0051
GLY 16GLY 17 0.0057
GLY 17GLN 18 -0.0016
GLN 18LEU 19 -0.0178
LEU 19LYS 20 -0.0015
LYS 20GLU 21 0.0414
GLU 21ALA 22 0.0194
ALA 22LEU 23 -0.0135
LEU 23LEU 24 0.0406
LEU 24ASP 25 0.0544
ASP 25THR 26 -0.0541
THR 26GLY 27 -0.0569
GLY 27ALA 28 -0.0172
ALA 28ASP 29 0.0166
ASP 29ASP 30 -0.0224
ASP 30THR 31 0.0188
THR 31VAL 32 -0.0257
VAL 32LEU 33 -0.0454
LEU 33GLU 34 0.0040
GLU 34GLU 35 0.0113
GLU 35MET 36 0.0270
MET 36SER 37 0.0054
SER 37LEU 38 -0.0082
LEU 38PRO 39 0.0087
PRO 39GLY 40 -0.0037
GLY 40ARG 41 0.0095
ARG 41TRP 42 0.0036
TRP 42LYS 43 -0.0155
LYS 43PRO 44 0.0252
PRO 44LYS 45 -0.0164
LYS 45MET 46 -0.0078
MET 46ILE 47 -0.0215
ILE 47GLY 48 -0.1069
GLY 48GLY 49 0.0221
GLY 49ILE 50 -0.0627
ILE 50GLY 51 -0.0013
GLY 51GLY 52 0.0001
GLY 52PHE 53 0.0334
PHE 53ILE 54 -0.0795
ILE 54LYS 55 0.1033
LYS 55VAL 56 0.0126
VAL 56ARG 57 0.0352
ARG 57GLN 58 0.0065
GLN 58TYR 59 -0.0091
TYR 59ASP 60 0.0000
ASP 60GLN 61 0.0028
GLN 61ILE 62 -0.0090
ILE 62LEU 63 0.0114
LEU 63ILE 64 -0.0047
ILE 64GLU 65 -0.0115
GLU 65ILE 66 -0.0175
ILE 66CYS 67 0.0191
CYS 67GLY 68 -0.0261
GLY 68HIS 69 0.0086
HIS 69LYS 70 0.0069
LYS 70ALA 71 0.0035
ALA 71ILE 72 0.0041
ILE 72GLY 73 -0.0123
GLY 73THR 74 0.0107
THR 74VAL 75 0.0121
VAL 75LEU 76 -0.0163
LEU 76VAL 77 -0.0252
VAL 77GLY 78 0.0072
GLY 78PRO 79 -0.0030
PRO 79THR 80 0.0240
THR 80PRO 81 -0.0036
PRO 81VAL 82 0.0109
VAL 82ASN 83 -0.0026
ASN 83ILE 84 -0.0267
ILE 84ILE 85 -0.0331
ILE 85GLY 86 0.0019
GLY 86ARG 87 0.0082
ARG 87ASN 88 0.0015
ASN 88LEU 89 -0.0027
LEU 89LEU 90 0.0288
LEU 90THR 91 -0.0302
THR 91GLN 92 0.0326
GLN 92ILE 93 0.0364
ILE 93GLY 94 0.0238
GLY 94CYS 95 -0.1051
CYS 95THR 96 0.0076
THR 96LEU 97 -0.1413
LEU 97ASN 98 -0.1326

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.