CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA distance fluctuations for 2604200934113787484

---  normal mode 10  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
VAL 11 0.57 PRO 1 -0.42 HIS 69
THR 26 0.31 GLN 2 -0.35 HIS 69
GLY 27 0.26 ILE 3 -0.60 CYS 67
PRO 81 0.16 THR 4 -0.82 ASN 98
PRO 81 0.22 LEU 5 -1.23 ASN 98
PRO 81 0.27 TRP 6 -1.20 ASN 98
PRO 81 0.33 GLN 7 -0.99 ASN 98
VAL 82 0.38 ARG 8 -0.87 ASN 98
PRO 1 0.43 PRO 9 -0.68 ASN 98
PRO 1 0.55 LEU 10 -0.44 ASN 98
PRO 1 0.57 VAL 11 -0.25 ASN 98
PRO 1 0.32 THR 12 -0.24 ILE 3
PRO 1 0.15 ILE 13 -0.25 ILE 3
CYS 95 0.05 LYS 14 -0.26 ILE 3
ALA 22 0.05 ILE 15 -0.20 ILE 3
ARG 8 0.05 GLY 16 -0.17 ILE 3
CYS 95 0.04 GLY 17 -0.20 ILE 3
GLN 7 0.07 GLN 18 -0.16 ILE 3
PRO 1 0.12 LEU 19 -0.18 ILE 3
PRO 1 0.22 LYS 20 -0.19 ASN 98
PRO 1 0.34 GLU 21 -0.25 ASN 98
PRO 1 0.34 ALA 22 -0.30 ASN 98
PRO 1 0.41 LEU 23 -0.41 ASN 98
PRO 1 0.40 LEU 24 -0.40 ASN 98
PRO 1 0.35 ASP 25 -0.47 ILE 50
GLN 2 0.31 THR 26 -0.49 ILE 50
GLN 2 0.28 GLY 27 -0.60 ILE 50
PRO 1 0.21 ALA 28 -0.57 ILE 50
GLN 2 0.13 ASP 29 -0.47 ILE 50
PRO 1 0.10 ASP 30 -0.39 GLY 49
PRO 1 0.12 THR 31 -0.32 ILE 50
ARG 8 0.16 VAL 32 -0.27 ILE 50
ARG 8 0.17 LEU 33 -0.20 ASN 98
ARG 8 0.20 GLU 34 -0.20 ASN 98
ARG 8 0.17 GLU 35 -0.16 ASN 98
ARG 8 0.12 MET 36 -0.14 ASN 98
ARG 8 0.10 SER 37 -0.11 ASN 98
ARG 8 0.07 LEU 38 -0.11 ILE 3
ARG 8 0.06 PRO 39 -0.12 ILE 3
ARG 8 0.05 GLY 40 -0.11 ILE 3
ARG 8 0.06 ARG 41 -0.09 ILE 3
ARG 8 0.08 TRP 42 -0.07 LEU 97
ARG 8 0.08 LYS 43 -0.07 ILE 47
ARG 8 0.11 PRO 44 -0.08 ASN 98
ARG 8 0.13 LYS 45 -0.10 ASN 98
ARG 8 0.15 MET 46 -0.14 ASN 98
ARG 8 0.17 ILE 47 -0.20 ASN 98
ARG 8 0.15 GLY 48 -0.35 ASP 29
PRO 79 0.12 GLY 49 -0.53 ALA 28
PRO 79 0.05 ILE 50 -0.60 GLY 27
LYS 55 0.05 GLY 51 -0.48 ASN 98
LYS 55 0.07 GLY 52 -0.38 ASN 98
GLN 7 0.09 PHE 53 -0.28 ASN 98
GLN 7 0.12 ILE 54 -0.25 ASN 98
ARG 8 0.13 LYS 55 -0.18 ASN 98
ARG 8 0.15 VAL 56 -0.15 ASN 98
ARG 8 0.12 ARG 57 -0.11 ASN 98
ARG 8 0.09 GLN 58 -0.12 GLY 49
ARG 8 0.06 TYR 59 -0.12 GLY 49
ARG 8 0.03 ASP 60 -0.15 GLY 49
THR 96 0.03 GLN 61 -0.16 THR 4
ALA 22 0.03 ILE 62 -0.17 ILE 3
THR 96 0.04 LEU 63 -0.23 ILE 3
ALA 22 0.04 ILE 64 -0.26 ILE 3
CYS 95 0.06 GLU 65 -0.36 ILE 3
CYS 95 0.09 ILE 66 -0.41 ILE 3
CYS 95 0.11 CYS 67 -0.60 ILE 3
CYS 95 0.08 GLY 68 -0.56 ILE 3
CYS 95 0.06 HIS 69 -0.52 ILE 3
THR 96 0.04 LYS 70 -0.39 ILE 3
THR 96 0.04 ALA 71 -0.31 ILE 3
THR 96 0.04 ILE 72 -0.24 THR 4
THR 96 0.04 GLY 73 -0.21 ILE 50
ARG 8 0.03 THR 74 -0.20 ILE 50
ARG 8 0.07 VAL 75 -0.20 ILE 50
ARG 8 0.12 LEU 76 -0.18 GLY 49
ARG 8 0.14 VAL 77 -0.15 ASN 98
ARG 8 0.18 GLY 78 -0.18 ASN 98
ARG 8 0.22 PRO 79 -0.21 ASN 98
ARG 8 0.26 THR 80 -0.25 ASN 98
ARG 8 0.35 PRO 81 -0.29 ASN 98
ARG 8 0.38 VAL 82 -0.32 ASN 98
PRO 1 0.26 ASN 83 -0.28 ASN 98
PRO 1 0.26 ILE 84 -0.36 ILE 50
PRO 1 0.20 ILE 85 -0.34 ILE 50
PRO 1 0.17 GLY 86 -0.41 ILE 50
PRO 1 0.09 ARG 87 -0.39 ILE 50
THR 96 0.04 ASN 88 -0.32 ILE 50
THR 96 0.05 LEU 89 -0.29 ILE 50
VAL 11 0.05 LEU 90 -0.34 LEU 5
ASN 98 0.10 THR 91 -0.34 LEU 5
ASN 98 0.12 GLN 92 -0.36 THR 4
ASN 98 0.08 ILE 93 -0.47 THR 4
ASN 98 0.23 GLY 94 -0.52 THR 4
VAL 11 0.12 CYS 95 -0.52 LEU 5
ASN 98 0.14 THR 96 -0.66 LEU 5
GLN 2 0.11 LEU 97 -0.87 LEU 5
GLY 94 0.23 ASN 98 -1.23 LEU 5

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.