CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA strain for 2604200934113787484

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
PRO 1GLN 2 -0.0690
GLN 2ILE 3 0.2284
ILE 3THR 4 0.0731
THR 4LEU 5 -0.0841
LEU 5TRP 6 0.0143
TRP 6GLN 7 0.0101
GLN 7ARG 8 0.0111
ARG 8PRO 9 -0.0256
PRO 9LEU 10 0.0488
LEU 10VAL 11 -0.0164
VAL 11THR 12 -0.1570
THR 12ILE 13 0.0080
ILE 13LYS 14 -0.0133
LYS 14ILE 15 -0.0128
ILE 15GLY 16 -0.0041
GLY 16GLY 17 0.0048
GLY 17GLN 18 0.0028
GLN 18LEU 19 -0.0200
LEU 19LYS 20 -0.0063
LYS 20GLU 21 0.0380
GLU 21ALA 22 0.0247
ALA 22LEU 23 -0.0098
LEU 23LEU 24 0.0566
LEU 24ASP 25 0.0332
ASP 25THR 26 0.0347
THR 26GLY 27 0.0737
GLY 27ALA 28 0.0092
ALA 28ASP 29 -0.0122
ASP 29ASP 30 0.0130
ASP 30THR 31 -0.0069
THR 31VAL 32 -0.0277
VAL 32LEU 33 -0.0110
LEU 33GLU 34 0.0013
GLU 34GLU 35 -0.0129
GLU 35MET 36 -0.0065
MET 36SER 37 0.0021
SER 37LEU 38 -0.0182
LEU 38PRO 39 0.0101
PRO 39GLY 40 0.0012
GLY 40ARG 41 -0.0001
ARG 41TRP 42 0.0059
TRP 42LYS 43 -0.0252
LYS 43PRO 44 0.0367
PRO 44LYS 45 -0.0258
LYS 45MET 46 0.0034
MET 46ILE 47 -0.0011
ILE 47GLY 48 -0.1500
GLY 48GLY 49 -0.0122
GLY 49ILE 50 -0.1178
ILE 50GLY 51 -0.0023
GLY 51GLY 52 0.0290
GLY 52PHE 53 0.0676
PHE 53ILE 54 -0.1693
ILE 54LYS 55 0.1251
LYS 55VAL 56 0.0254
VAL 56ARG 57 0.0421
ARG 57GLN 58 0.0108
GLN 58TYR 59 0.0038
TYR 59ASP 60 0.0122
ASP 60GLN 61 -0.0002
GLN 61ILE 62 0.0184
ILE 62LEU 63 -0.0144
LEU 63ILE 64 -0.0010
ILE 64GLU 65 0.0043
GLU 65ILE 66 -0.0279
ILE 66CYS 67 -0.0108
CYS 67GLY 68 -0.0163
GLY 68HIS 69 0.0029
HIS 69LYS 70 0.0113
LYS 70ALA 71 -0.0029
ALA 71ILE 72 -0.0015
ILE 72GLY 73 0.0015
GLY 73THR 74 -0.0041
THR 74VAL 75 -0.0064
VAL 75LEU 76 -0.0287
LEU 76VAL 77 -0.0043
VAL 77GLY 78 0.0097
GLY 78PRO 79 0.0040
PRO 79THR 80 0.0304
THR 80PRO 81 0.0067
PRO 81VAL 82 0.0070
VAL 82ASN 83 -0.0016
ASN 83ILE 84 -0.0182
ILE 84ILE 85 -0.0245
ILE 85GLY 86 -0.0031
GLY 86ARG 87 0.0054
ARG 87ASN 88 0.0017
ASN 88LEU 89 -0.0047
LEU 89LEU 90 -0.0062
LEU 90THR 91 0.0324
THR 91GLN 92 -0.0032
GLN 92ILE 93 0.0261
ILE 93GLY 94 0.0224
GLY 94CYS 95 -0.0353
CYS 95THR 96 -0.1036
THR 96LEU 97 0.2700
LEU 97ASN 98 0.1095

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.