CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA distance fluctuations for 2604200934113787484

---  normal mode 12  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
ILE 50 0.25 PRO 1 -0.12 VAL 11
ILE 50 0.22 GLN 2 -0.08 ASP 25
ILE 50 0.27 ILE 3 -0.08 ASP 25
ILE 50 0.16 THR 4 -0.39 LEU 97
ILE 50 0.14 LEU 5 -0.40 THR 26
ILE 50 0.18 TRP 6 -0.34 GLY 27
ILE 50 0.41 GLN 7 -0.14 GLY 27
ILE 50 0.46 ARG 8 -0.13 VAL 82
ILE 50 0.44 PRO 9 -0.11 MET 36
ILE 50 0.62 LEU 10 -0.11 MET 36
ILE 50 0.59 VAL 11 -0.12 PRO 1
ILE 50 0.64 THR 12 -0.08 MET 36
ILE 50 0.59 ILE 13 -0.07 MET 36
ILE 50 0.58 LYS 14 -0.07 GLY 40
ILE 50 0.54 ILE 15 -0.10 GLY 40
ILE 50 0.54 GLY 16 -0.13 GLY 40
ILE 50 0.58 GLY 17 -0.11 GLY 40
ILE 50 0.70 GLN 18 -0.10 PRO 39
ILE 50 0.72 LEU 19 -0.08 PRO 39
ILE 50 0.79 LYS 20 -0.19 MET 36
ILE 50 0.79 GLU 21 -0.15 MET 36
ILE 50 0.71 ALA 22 -0.15 MET 36
ILE 50 0.58 LEU 23 -0.20 LEU 5
ILE 50 0.37 LEU 24 -0.27 LEU 5
ILE 50 0.23 ASP 25 -0.40 LEU 5
LYS 45 0.07 THR 26 -0.40 LEU 5
LYS 45 0.09 GLY 27 -0.40 LEU 5
LYS 45 0.11 ALA 28 -0.31 LEU 5
PRO 44 0.11 ASP 29 -0.38 GLY 48
PRO 44 0.12 ASP 30 -0.30 GLY 48
ILE 50 0.30 THR 31 -0.18 LEU 5
ILE 50 0.49 VAL 32 -0.17 LEU 5
ILE 50 0.67 LEU 33 -0.14 LEU 5
ILE 50 0.82 GLU 34 -0.13 LEU 5
ILE 50 0.74 GLU 35 -0.11 LEU 5
ILE 50 0.66 MET 36 -0.19 LYS 20
ILE 50 0.53 SER 37 -0.15 LYS 20
ILE 50 0.45 LEU 38 -0.13 LYS 20
ILE 50 0.38 PRO 39 -0.12 GLY 16
ILE 50 0.31 GLY 40 -0.13 GLY 16
ILE 50 0.23 ARG 41 -0.08 LEU 5
ILE 50 0.22 TRP 42 -0.09 LEU 5
ILE 50 0.11 LYS 43 -0.11 MET 46
ASP 30 0.12 PRO 44 -0.09 PHE 53
ALA 28 0.11 LYS 45 -0.15 MET 46
ILE 54 0.16 MET 46 -0.18 PHE 53
VAL 82 0.19 ILE 47 -0.17 GLY 48
GLY 49 0.39 GLY 48 -0.38 ASP 29
VAL 82 0.47 GLY 49 -0.42 ILE 54
PRO 81 1.37 ILE 50 -0.14 ASP 29
PRO 81 0.99 GLY 51 -0.14 ASP 29
PRO 79 0.66 GLY 52 -0.21 ASP 29
PRO 79 0.35 PHE 53 -0.19 ASP 29
LYS 55 0.27 ILE 54 -0.42 GLY 49
ILE 54 0.27 LYS 55 -0.14 LEU 5
ILE 50 0.31 VAL 56 -0.13 LEU 5
ILE 50 0.30 ARG 57 -0.11 LEU 5
ILE 50 0.21 GLN 58 -0.12 GLY 48
ILE 50 0.25 TYR 59 -0.11 GLY 48
ILE 50 0.16 ASP 60 -0.17 GLY 48
ILE 50 0.18 GLN 61 -0.15 GLY 48
ILE 50 0.30 ILE 62 -0.09 GLY 48
ILE 50 0.33 LEU 63 -0.07 GLY 48
ILE 50 0.41 ILE 64 -0.06 LEU 5
ILE 50 0.42 GLU 65 -0.05 GLY 40
ILE 50 0.43 ILE 66 -0.04 GLY 40
ILE 50 0.43 CYS 67 -0.04 GLY 40
ILE 50 0.40 GLY 68 -0.04 GLY 40
ILE 50 0.32 HIS 69 -0.06 GLY 48
ILE 50 0.31 LYS 70 -0.07 GLY 48
ILE 50 0.25 ALA 71 -0.11 GLY 48
ILE 50 0.21 ILE 72 -0.14 GLY 48
ILE 50 0.17 GLY 73 -0.18 GLY 48
ILE 50 0.17 THR 74 -0.20 GLY 48
ILE 50 0.31 VAL 75 -0.13 LEU 5
ILE 50 0.33 LEU 76 -0.13 LEU 5
ILE 50 0.51 VAL 77 -0.13 LEU 5
ILE 50 0.61 GLY 78 -0.14 LEU 5
ILE 50 0.87 PRO 79 -0.14 LEU 5
ILE 50 0.97 THR 80 -0.20 ALA 28
ILE 50 1.37 PRO 81 -0.27 ALA 28
ILE 50 1.05 VAL 82 -0.19 LEU 5
ILE 50 0.81 ASN 83 -0.16 LEU 5
ILE 50 0.56 ILE 84 -0.22 LEU 5
ILE 50 0.38 ILE 85 -0.20 LEU 5
ILE 50 0.17 GLY 86 -0.25 LEU 5
PRO 44 0.07 ARG 87 -0.24 LEU 5
LYS 43 0.06 ASN 88 -0.27 GLY 48
ILE 50 0.17 LEU 89 -0.17 GLY 48
ILE 50 0.15 LEU 90 -0.18 THR 4
ILE 50 0.05 THR 91 -0.19 GLY 48
ILE 50 0.12 GLN 92 -0.16 GLY 48
ILE 50 0.20 ILE 93 -0.11 GLY 48
ILE 50 0.11 GLY 94 -0.13 GLY 48
ILE 50 0.12 CYS 95 -0.20 THR 4
PRO 9 0.07 THR 96 -0.27 THR 4
PRO 9 0.13 LEU 97 -0.39 THR 4
ARG 8 0.18 ASN 98 -0.21 THR 4

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.