CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA distance fluctuations for 2604200934113787484

---  normal mode 13  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
GLY 94 0.44 PRO 1 -0.52 GLN 2
GLY 94 0.37 GLN 2 -0.53 THR 12
GLY 94 0.58 ILE 3 -0.45 ASN 98
THR 26 0.83 THR 4 -0.21 THR 12
GLY 48 0.27 LEU 5 -1.10 ASN 98
PRO 1 0.35 TRP 6 -0.66 ASN 98
CYS 67 0.36 GLN 7 -0.58 ASN 98
LEU 5 0.24 ARG 8 -0.60 ASN 98
GLY 48 0.24 PRO 9 -0.68 ASN 98
VAL 11 0.22 LEU 10 -0.55 ASN 98
GLN 7 0.31 VAL 11 -0.54 ASN 98
GLN 7 0.25 THR 12 -0.53 GLN 2
GLN 7 0.16 ILE 13 -0.36 GLN 2
GLN 7 0.15 LYS 14 -0.32 GLN 2
GLY 48 0.12 ILE 15 -0.22 GLN 2
VAL 75 0.14 GLY 16 -0.21 GLN 2
GLY 48 0.11 GLY 17 -0.29 GLN 2
GLY 48 0.15 GLN 18 -0.31 GLN 2
GLY 48 0.14 LEU 19 -0.39 GLN 2
GLY 48 0.16 LYS 20 -0.36 GLN 2
GLY 48 0.19 GLU 21 -0.42 ASN 98
GLY 48 0.24 ALA 22 -0.40 ASN 98
GLY 48 0.30 LEU 23 -0.45 ASN 98
THR 4 0.37 LEU 24 -0.50 LEU 97
THR 4 0.56 ASP 25 -0.30 LEU 97
THR 4 0.83 THR 26 -0.25 TRP 6
THR 4 0.69 GLY 27 -0.35 TRP 6
THR 4 0.53 ALA 28 -0.28 TRP 6
THR 4 0.54 ASP 29 -0.21 TRP 6
THR 4 0.43 ASP 30 -0.17 TRP 6
THR 4 0.33 THR 31 -0.12 TRP 6
THR 4 0.24 VAL 32 -0.15 GLY 51
GLY 48 0.18 LEU 33 -0.20 ASN 98
GLY 48 0.14 GLU 34 -0.23 ASN 98
GLY 48 0.10 GLU 35 -0.21 GLN 2
GLY 48 0.08 MET 36 -0.22 GLN 2
VAL 75 0.09 SER 37 -0.18 GLN 2
VAL 75 0.12 LEU 38 -0.14 GLN 2
GLN 61 0.09 PRO 39 -0.12 GLN 2
THR 4 0.10 GLY 40 -0.11 LEU 63
THR 4 0.14 ARG 41 -0.10 LEU 63
THR 4 0.18 TRP 42 -0.09 LEU 63
THR 4 0.24 LYS 43 -0.09 LYS 45
ASP 29 0.27 PRO 44 -0.15 SER 37
ASP 29 0.36 LYS 45 -0.09 LYS 43
ASP 29 0.40 MET 46 -0.08 GLN 7
THR 4 0.39 ILE 47 -0.13 GLY 49
ALA 28 0.48 GLY 48 -0.08 PHE 53
THR 4 0.29 GLY 49 -0.23 GLN 7
THR 4 0.19 ILE 50 -0.33 GLN 7
THR 4 0.13 GLY 51 -0.38 GLN 7
THR 4 0.26 GLY 52 -0.24 GLN 7
THR 4 0.32 PHE 53 -0.16 GLN 7
THR 4 0.23 ILE 54 -0.18 GLN 7
ASP 29 0.24 LYS 55 -0.14 GLN 7
THR 4 0.21 VAL 56 -0.13 GLN 7
THR 4 0.19 ARG 57 -0.12 SER 37
THR 4 0.24 GLN 58 -0.10 GLY 49
THR 4 0.20 TYR 59 -0.09 ILE 62
THR 4 0.26 ASP 60 -0.09 GLY 49
THR 4 0.24 GLN 61 -0.07 GLY 49
THR 4 0.18 ILE 62 -0.09 TYR 59
THR 4 0.15 LEU 63 -0.11 GLY 40
ILE 3 0.13 ILE 64 -0.17 CYS 95
GLN 7 0.18 GLU 65 -0.27 CYS 95
GLN 7 0.21 ILE 66 -0.40 CYS 95
GLN 7 0.36 CYS 67 -0.46 THR 96
GLN 7 0.32 GLY 68 -0.37 CYS 95
GLN 7 0.26 HIS 69 -0.29 CYS 95
ILE 3 0.21 LYS 70 -0.18 CYS 95
ILE 3 0.28 ALA 71 -0.10 CYS 95
THR 4 0.27 ILE 72 -0.07 GLY 51
THR 4 0.30 GLY 73 -0.08 ILE 50
THR 4 0.30 THR 74 -0.09 ILE 50
THR 4 0.24 VAL 75 -0.11 GLY 51
THR 4 0.24 LEU 76 -0.13 GLY 51
THR 4 0.12 VAL 77 -0.13 GLY 51
GLY 48 0.12 GLY 78 -0.17 GLN 7
GLY 48 0.15 PRO 79 -0.23 GLY 51
GLY 48 0.22 THR 80 -0.28 GLY 51
GLY 48 0.17 PRO 81 -0.36 GLY 51
GLY 48 0.29 VAL 82 -0.32 ASN 98
GLY 48 0.26 ASN 83 -0.30 ASN 98
GLY 48 0.34 ILE 84 -0.26 ASN 98
THR 4 0.33 ILE 85 -0.22 LEU 97
THR 4 0.50 GLY 86 -0.15 TRP 6
THR 4 0.61 ARG 87 -0.14 TRP 6
THR 4 0.50 ASN 88 -0.09 TRP 6
THR 4 0.44 LEU 89 -0.06 ILE 50
THR 4 0.57 LEU 90 -0.18 THR 91
THR 4 0.52 THR 91 -0.18 LEU 90
ILE 3 0.45 GLN 92 -0.12 ILE 93
ILE 3 0.55 ILE 93 -0.12 GLN 92
ILE 3 0.58 GLY 94 -0.13 THR 91
THR 4 0.63 CYS 95 -0.46 CYS 67
THR 4 0.48 THR 96 -0.55 LEU 5
THR 4 0.52 LEU 97 -0.90 LEU 5
MET 46 0.15 ASN 98 -1.10 LEU 5

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.