CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA distance fluctuations for 2604200934113787484

---  normal mode 15  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
TRP 6 0.42 PRO 1 -0.52 GLY 94
PRO 1 0.41 GLN 2 -0.34 LEU 5
ASN 98 0.84 ILE 3 -0.52 LEU 5
LEU 97 1.27 THR 4 -0.15 GLN 7
ASN 98 0.59 LEU 5 -0.52 ILE 3
ASN 98 0.52 TRP 6 -0.41 GLY 27
ASN 98 0.57 GLN 7 -0.33 ARG 8
ASN 98 0.51 ARG 8 -0.33 GLN 7
ASN 98 0.59 PRO 9 -0.14 ILE 93
ASN 98 0.49 LEU 10 -0.16 GLY 51
ASN 98 0.46 VAL 11 -0.15 GLY 51
ILE 50 0.42 THR 12 -0.17 GLY 51
ILE 50 0.42 ILE 13 -0.15 GLY 51
ILE 50 0.43 LYS 14 -0.15 GLY 51
ILE 50 0.43 ILE 15 -0.16 GLY 51
ILE 50 0.44 GLY 16 -0.17 GLY 51
ILE 50 0.43 GLY 17 -0.19 GLY 51
ILE 50 0.49 GLN 18 -0.24 GLY 51
ILE 50 0.51 LEU 19 -0.21 GLY 51
ILE 50 0.59 LYS 20 -0.22 GLY 51
ILE 50 0.55 GLU 21 -0.21 GLY 51
ILE 50 0.48 ALA 22 -0.19 GLY 51
ASN 98 0.40 LEU 23 -0.15 GLY 51
THR 4 0.52 LEU 24 -0.16 ILE 93
THR 4 0.74 ASP 25 -0.29 TRP 6
THR 4 1.01 THR 26 -0.35 TRP 6
THR 4 0.89 GLY 27 -0.41 TRP 6
THR 4 0.68 ALA 28 -0.29 TRP 6
THR 4 0.65 ASP 29 -0.26 LYS 45
THR 4 0.51 ASP 30 -0.23 LYS 45
GLY 48 0.44 THR 31 -0.14 TRP 6
GLY 48 0.57 VAL 32 -0.12 GLN 18
ILE 50 0.61 LEU 33 -0.19 GLY 51
ILE 50 0.86 GLU 34 -0.25 GLY 51
ILE 50 0.84 GLU 35 -0.24 GLY 51
ILE 50 0.71 MET 36 -0.21 GLY 51
ILE 50 0.60 SER 37 -0.16 GLY 51
ILE 50 0.49 LEU 38 -0.13 GLY 51
ILE 50 0.42 PRO 39 -0.13 GLN 61
ILE 50 0.33 GLY 40 -0.09 GLY 51
ILE 50 0.26 ARG 41 -0.10 ASP 29
ILE 50 0.26 TRP 42 -0.13 ASP 29
THR 4 0.21 LYS 43 -0.19 ASP 29
THR 4 0.21 PRO 44 -0.21 ASP 29
THR 4 0.23 LYS 45 -0.26 ASP 29
THR 4 0.27 MET 46 -0.21 TRP 6
THR 4 0.31 ILE 47 -0.25 TRP 6
THR 80 0.60 GLY 48 -0.23 ILE 50
GLY 48 0.47 GLY 49 -0.25 TRP 6
PRO 81 1.14 ILE 50 -0.25 GLY 27
GLY 52 0.26 GLY 51 -0.48 PRO 81
THR 4 0.33 GLY 52 -0.23 ILE 54
THR 4 0.32 PHE 53 -0.18 TRP 6
ILE 50 0.30 ILE 54 -0.23 GLY 51
ILE 50 0.32 LYS 55 -0.16 TRP 6
ILE 50 0.43 VAL 56 -0.14 GLY 51
ILE 50 0.37 ARG 57 -0.14 ASP 30
ILE 50 0.25 GLN 58 -0.17 ASP 30
ILE 50 0.28 TYR 59 -0.11 ASP 30
THR 4 0.25 ASP 60 -0.14 THR 91
THR 4 0.23 GLN 61 -0.13 PRO 39
ILE 50 0.28 ILE 62 -0.10 GLY 73
ILE 50 0.28 LEU 63 -0.09 PRO 1
ILE 50 0.32 ILE 64 -0.09 GLY 51
ILE 50 0.30 GLU 65 -0.11 LEU 5
CYS 95 0.38 ILE 66 -0.13 LEU 5
CYS 95 0.44 CYS 67 -0.19 LEU 5
CYS 95 0.34 GLY 68 -0.17 LEU 5
CYS 95 0.26 HIS 69 -0.24 PRO 1
ILE 50 0.22 LYS 70 -0.19 PRO 1
THR 4 0.22 ALA 71 -0.22 PRO 1
THR 4 0.24 ILE 72 -0.19 PRO 1
THR 4 0.32 GLY 73 -0.17 PRO 1
THR 4 0.31 THR 74 -0.13 PRO 1
GLY 48 0.37 VAL 75 -0.13 GLN 18
GLY 48 0.40 LEU 76 -0.14 ASP 30
ILE 50 0.56 VAL 77 -0.17 GLY 51
ILE 50 0.73 GLY 78 -0.23 GLY 51
ILE 50 1.07 PRO 79 -0.35 GLY 51
ILE 50 0.96 THR 80 -0.35 GLY 51
ILE 50 1.14 PRO 81 -0.48 GLY 51
ILE 50 0.79 VAL 82 -0.30 GLY 51
ILE 50 0.63 ASN 83 -0.22 GLY 51
GLY 48 0.44 ILE 84 -0.14 GLY 51
THR 4 0.42 ILE 85 -0.11 TRP 6
THR 4 0.60 GLY 86 -0.20 TRP 6
THR 4 0.71 ARG 87 -0.20 PRO 1
THR 4 0.55 ASN 88 -0.20 PRO 1
THR 4 0.46 LEU 89 -0.22 PRO 1
THR 4 0.58 LEU 90 -0.29 PRO 1
THR 4 0.64 THR 91 -0.28 PRO 1
THR 4 0.41 GLN 92 -0.36 PRO 1
THR 4 0.29 ILE 93 -0.50 PRO 1
THR 4 0.49 GLY 94 -0.52 PRO 1
THR 4 0.68 CYS 95 -0.20 THR 91
THR 4 0.97 THR 96 -0.16 LYS 45
THR 4 1.27 LEU 97 -0.20 GLN 2
THR 4 1.12 ASN 98 -0.13 GLY 94

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.