CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

CA distance fluctuations for 2604200934113787484

---  normal mode 16  ---

This matrix displays the maximum distance fluctuations between all pairs of CA atoms and between the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Distance increases are plotted in blue and decreases in red for the strongest 10% of the residue pair distance changes. Every pixel corresponds to a single residue. Grey lines are drawn every 10 residues, yellow lines every 100 residues (counting from the upper left corner).

The following table indicates for every residue the two corresponding residues with the strongest CA distance fluctuations.

[HELP on distance fluctuations]

GD ok
largest increasereflargest decrease
LEU 5 0.16 PRO 1 -0.42 GLN 2
THR 26 0.21 GLN 2 -0.42 PRO 1
LEU 5 0.31 ILE 3 -0.61 ASN 98
GLN 7 0.20 THR 4 -1.46 ASN 98
ILE 3 0.31 LEU 5 -1.28 ASN 98
GLY 27 0.41 TRP 6 -0.85 ASN 98
GLY 27 0.22 GLN 7 -0.91 ASN 98
ILE 50 0.18 ARG 8 -0.94 ASN 98
ILE 50 0.17 PRO 9 -0.90 ASN 98
ILE 50 0.32 LEU 10 -0.68 ASN 98
ILE 50 0.32 VAL 11 -0.52 ASN 98
ILE 50 0.38 THR 12 -0.40 ASN 98
ILE 50 0.39 ILE 13 -0.30 ASN 98
ILE 50 0.41 LYS 14 -0.22 ASN 98
ILE 50 0.41 ILE 15 -0.20 ASN 98
ILE 50 0.41 GLY 16 -0.20 GLY 51
ILE 50 0.41 GLY 17 -0.19 GLY 51
ILE 50 0.49 GLN 18 -0.24 ASN 98
ILE 50 0.48 LEU 19 -0.29 ASN 98
ILE 50 0.51 LYS 20 -0.36 ASN 98
ILE 50 0.48 GLU 21 -0.46 ASN 98
ILE 50 0.47 ALA 22 -0.51 ASN 98
ILE 50 0.36 LEU 23 -0.65 ASN 98
ILE 50 0.20 LEU 24 -0.62 ASN 98
TRP 6 0.27 ASP 25 -0.61 ASN 98
TRP 6 0.35 THR 26 -0.44 MET 46
TRP 6 0.41 GLY 27 -0.55 MET 46
TRP 6 0.29 ALA 28 -0.57 MET 46
TRP 6 0.24 ASP 29 -0.62 LYS 45
GLY 48 0.32 ASP 30 -0.58 LYS 45
GLY 48 0.37 THR 31 -0.35 LYS 45
ILE 50 0.54 VAL 32 -0.36 ASN 98
ILE 50 0.59 LEU 33 -0.34 ASN 98
ILE 50 0.66 GLU 34 -0.46 GLY 51
ILE 50 0.59 GLU 35 -0.49 GLY 51
ILE 50 0.50 MET 36 -0.38 GLY 51
ILE 50 0.43 SER 37 -0.31 GLY 51
ILE 50 0.36 LEU 38 -0.26 GLY 51
ILE 50 0.29 PRO 39 -0.25 GLY 51
ILE 50 0.24 GLY 40 -0.21 GLY 51
LEU 63 0.21 ARG 41 -0.20 GLY 51
ILE 50 0.22 TRP 42 -0.17 GLY 51
SER 37 0.24 LYS 43 -0.23 ASP 29
SER 37 0.42 PRO 44 -0.46 ASP 29
SER 37 0.24 LYS 45 -0.62 ASP 29
SER 37 0.19 MET 46 -0.57 ALA 28
GLY 48 0.29 ILE 47 -0.53 GLY 27
LEU 76 0.52 GLY 48 -0.37 ASN 98
VAL 32 0.29 GLY 49 -0.46 ASN 98
PRO 81 1.09 ILE 50 -0.44 ASN 98
GLY 52 0.19 GLY 51 -0.66 PRO 79
GLY 51 0.19 GLY 52 -0.33 ASN 98
LEU 76 0.16 PHE 53 -0.38 ASN 98
ILE 50 0.34 ILE 54 -0.43 ASN 98
ILE 50 0.26 LYS 55 -0.37 ASN 98
ILE 50 0.38 VAL 56 -0.33 ASN 98
SER 37 0.41 ARG 57 -0.27 ASP 29
GLY 48 0.38 GLN 58 -0.23 ASP 30
GLY 48 0.33 TYR 59 -0.15 THR 4
GLY 48 0.33 ASP 60 -0.15 THR 4
GLY 48 0.28 GLN 61 -0.16 ILE 62
ILE 50 0.32 ILE 62 -0.16 GLN 61
ILE 50 0.33 LEU 63 -0.10 THR 4
ILE 50 0.37 ILE 64 -0.11 ASN 98
ILE 50 0.32 GLU 65 -0.14 GLN 2
ILE 50 0.29 ILE 66 -0.22 ASN 98
ILE 50 0.27 CYS 67 -0.28 GLN 2
ILE 50 0.26 GLY 68 -0.25 GLN 2
ILE 50 0.23 HIS 69 -0.15 GLN 2
ILE 50 0.25 LYS 70 -0.11 GLN 2
ILE 50 0.24 ALA 71 -0.15 THR 4
ILE 50 0.24 ILE 72 -0.15 THR 4
GLY 48 0.27 GLY 73 -0.18 LYS 45
GLY 48 0.35 THR 74 -0.19 LYS 45
GLY 48 0.44 VAL 75 -0.18 THR 4
GLY 48 0.52 LEU 76 -0.26 ASN 98
ILE 50 0.51 VAL 77 -0.28 GLY 51
ILE 50 0.63 GLY 78 -0.42 GLY 51
ILE 50 0.84 PRO 79 -0.66 GLY 51
ILE 50 0.98 THR 80 -0.52 GLY 51
ILE 50 1.09 PRO 81 -0.63 GLY 51
ILE 50 0.81 VAL 82 -0.55 ASN 98
ILE 50 0.62 ASN 83 -0.47 ASN 98
ILE 50 0.45 ILE 84 -0.49 ASN 98
ILE 50 0.31 ILE 85 -0.39 ASN 98
ILE 50 0.18 GLY 86 -0.41 LYS 45
TRP 6 0.18 ARG 87 -0.41 LYS 45
GLY 48 0.17 ASN 88 -0.40 LYS 45
ILE 50 0.20 LEU 89 -0.28 LYS 45
ILE 50 0.12 LEU 90 -0.35 THR 4
LEU 97 0.17 THR 91 -0.36 THR 4
LEU 97 0.15 GLN 92 -0.26 THR 4
ILE 50 0.15 ILE 93 -0.25 THR 4
ASN 98 0.19 GLY 94 -0.39 THR 4
LEU 97 0.14 CYS 95 -0.52 THR 4
LEU 97 0.26 THR 96 -0.91 THR 4
THR 96 0.26 LEU 97 -1.31 THR 4
GLY 94 0.19 ASN 98 -1.46 THR 4

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.