CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 27  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4757
PRO 10.1113
GLN 20.2082
ILE 30.1327
THR 40.0407
LEU 50.0197
TRP 60.0500
GLN 70.1046
ARG 80.0220
PRO 90.0615
LEU 100.0315
VAL 110.0623
THR 120.0781
ILE 130.0747
LYS 140.1191
ILE 150.1042
GLY 160.1127
GLY 170.1050
GLN 180.0678
LEU 190.1557
LYS 200.0602
GLU 210.0540
ALA 220.0207
LEU 230.0249
LEU 240.0458
ASP 250.0669
THR 260.0472
GLY 270.0840
ALA 280.0607
ASP 290.0719
ASP 300.0493
THR 310.0384
VAL 320.0357
LEU 330.0318
GLU 340.0317
GLU 350.0688
MET 360.1170
SER 370.1592
LEU 380.1508
PRO 390.1942
GLY 400.0999
ARG 410.0979
TRP 420.0683
LYS 430.1137
PRO 440.0975
LYS 450.1186
MET 460.1251
ILE 470.0699
GLY 480.2657
GLY 490.1150
ILE 500.1267
GLY 510.1603
GLY 520.4757
PHE 530.1206
ILE 540.0866
LYS 550.0823
VAL 560.0555
ARG 570.0615
GLN 580.0775
TYR 590.0681
ASP 600.0453
GLN 610.0563
ILE 620.0669
LEU 630.0578
ILE 640.0745
GLU 650.0919
ILE 660.0790
CYS 670.1401
GLY 680.0950
HIS 690.0731
LYS 700.0620
ALA 710.0538
ILE 720.0578
GLY 730.0669
THR 740.0644
VAL 750.0637
LEU 760.0598
VAL 770.0450
GLY 780.0349
PRO 790.0451
THR 800.0333
PRO 810.0994
VAL 820.1049
ASN 830.0477
ILE 840.0321
ILE 850.0314
GLY 860.0431
ARG 870.0537
ASN 880.0498
LEU 890.0509
LEU 900.0326
THR 910.0375
GLN 920.0307
ILE 930.0381
GLY 940.0152
CYS 950.0339
THR 960.0385
LEU 970.1088
ASN 980.1827
PHE 990.0415

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.