CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3846
PRO 10.3633
GLN 20.1307
ILE 30.1081
THR 40.0889
LEU 50.0743
TRP 60.0532
GLN 70.0308
ARG 80.0335
PRO 90.0526
LEU 100.0569
VAL 110.0319
THR 120.0096
ILE 130.0144
LYS 140.0214
ILE 150.0396
GLY 160.0991
GLY 170.1360
GLN 180.0755
LEU 190.0484
LYS 200.0342
GLU 210.0182
ALA 220.0231
LEU 230.0204
LEU 240.0080
ASP 250.0181
THR 260.0198
GLY 270.1333
ALA 280.0582
ASP 290.0532
ASP 300.0421
THR 310.0325
VAL 320.0208
LEU 330.0401
GLU 340.1006
GLU 350.0103
MET 360.1039
SER 370.1445
LEU 380.0967
PRO 390.1427
GLY 400.0953
ARG 410.0162
TRP 420.0237
LYS 430.0639
PRO 440.2813
LYS 450.0584
MET 460.0911
ILE 470.0750
GLY 480.3796
GLY 490.2153
ILE 500.0728
GLY 510.0302
GLY 520.1032
PHE 530.1083
ILE 540.0678
LYS 550.1106
VAL 560.0581
ARG 570.0320
GLN 580.0328
TYR 590.0128
ASP 600.0218
GLN 610.0317
ILE 620.0160
LEU 630.0394
ILE 640.0343
GLU 650.0273
ILE 660.0267
CYS 670.0374
GLY 680.0687
HIS 690.1058
LYS 700.0567
ALA 710.0484
ILE 720.0359
GLY 730.0300
THR 740.0293
VAL 750.0339
LEU 760.0294
VAL 770.0353
GLY 780.0317
PRO 790.0441
THR 800.1092
PRO 810.3846
VAL 820.0899
ASN 830.0304
ILE 840.0560
ILE 850.0218
GLY 860.0314
ARG 870.0405
ASN 880.0404
LEU 890.0431
LEU 900.0450
THR 910.0493
GLN 920.0554
ILE 930.0662
GLY 940.1242
CYS 950.0532
THR 960.1846
LEU 970.1134
ASN 980.1593
PHE 990.0238

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.