CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 35  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2944
PRO 10.0546
GLN 20.0213
ILE 30.0638
THR 40.0859
LEU 50.0544
TRP 60.0544
GLN 70.0815
ARG 80.1183
PRO 90.0897
LEU 100.0309
VAL 110.0701
THR 120.1176
ILE 130.1354
LYS 140.0737
ILE 150.1809
GLY 160.1738
GLY 170.2944
GLN 180.1218
LEU 190.0613
LYS 200.0377
GLU 210.0463
ALA 220.0434
LEU 230.0677
LEU 240.0810
ASP 250.1001
THR 260.0840
GLY 270.1138
ALA 280.0831
ASP 290.0955
ASP 300.0605
THR 310.0780
VAL 320.0433
LEU 330.0630
GLU 340.0612
GLU 350.1505
MET 360.0968
SER 370.0938
LEU 380.0801
PRO 390.0827
GLY 400.1647
ARG 410.1339
TRP 420.1150
LYS 430.2784
PRO 440.2705
LYS 450.0803
MET 460.0558
ILE 470.0653
GLY 480.0835
GLY 490.1626
ILE 500.0836
GLY 510.0915
GLY 520.1196
PHE 530.1131
ILE 540.1256
LYS 550.1067
VAL 560.0559
ARG 570.0600
GLN 580.0777
TYR 590.0192
ASP 600.0579
GLN 610.0944
ILE 620.0732
LEU 630.1103
ILE 640.1794
GLU 650.0991
ILE 660.1048
CYS 670.1539
GLY 680.0618
HIS 690.1017
LYS 700.0813
ALA 710.0482
ILE 720.0418
GLY 730.0412
THR 740.0339
VAL 750.0534
LEU 760.0513
VAL 770.0794
GLY 780.0816
PRO 790.1150
THR 800.0341
PRO 810.1578
VAL 820.0436
ASN 830.0643
ILE 840.0726
ILE 850.0946
GLY 860.0930
ARG 870.0826
ASN 880.0470
LEU 890.0568
LEU 900.0547
THR 910.0603
GLN 920.0461
ILE 930.0687
GLY 940.1036
CYS 950.0510
THR 960.0404
LEU 970.0389
ASN 980.0273
PHE 990.0027

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.