CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 39  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4023
PRO 10.1091
GLN 20.0717
ILE 30.0624
THR 40.0543
LEU 50.1190
TRP 60.1247
GLN 70.1082
ARG 80.0690
PRO 90.0942
LEU 100.0605
VAL 110.0531
THR 120.0400
ILE 130.0300
LYS 140.1462
ILE 150.0434
GLY 160.1318
GLY 170.2252
GLN 180.1148
LEU 190.4023
LYS 200.1111
GLU 210.1144
ALA 220.0528
LEU 230.0340
LEU 240.0793
ASP 250.1002
THR 260.0705
GLY 270.1041
ALA 280.0943
ASP 290.1174
ASP 300.0854
THR 310.1221
VAL 320.0784
LEU 330.0677
GLU 340.0810
GLU 350.0617
MET 360.0974
SER 370.1223
LEU 380.1909
PRO 390.2734
GLY 400.1488
ARG 410.2297
TRP 420.0812
LYS 430.1627
PRO 440.0509
LYS 450.0343
MET 460.0294
ILE 470.0328
GLY 480.0660
GLY 490.0649
ILE 500.0723
GLY 510.0609
GLY 520.0735
PHE 530.1059
ILE 540.0431
LYS 550.0210
VAL 560.0252
ARG 570.0306
GLN 580.0788
TYR 590.1192
ASP 600.1203
GLN 610.1722
ILE 620.1131
LEU 630.0606
ILE 640.0554
GLU 650.0763
ILE 660.0515
CYS 670.1003
GLY 680.0648
HIS 690.0613
LYS 700.0477
ALA 710.0672
ILE 720.0697
GLY 730.0792
THR 740.0433
VAL 750.0314
LEU 760.0559
VAL 770.0345
GLY 780.0326
PRO 790.0413
THR 800.0474
PRO 810.0514
VAL 820.0308
ASN 830.0532
ILE 840.0610
ILE 850.0708
GLY 860.1035
ARG 870.0842
ASN 880.0376
LEU 890.0697
LEU 900.0627
THR 910.0596
GLN 920.0732
ILE 930.0748
GLY 940.0515
CYS 950.0469
THR 960.0873
LEU 970.0919
ASN 980.0675
PHE 990.0839

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.