CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 40  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4705
PRO 10.2104
GLN 20.2508
ILE 30.1053
THR 40.0623
LEU 50.0111
TRP 60.0511
GLN 70.0652
ARG 80.1217
PRO 90.1030
LEU 100.1245
VAL 110.0877
THR 120.0825
ILE 130.0707
LYS 140.0829
ILE 150.0355
GLY 160.0358
GLY 170.0839
GLN 180.0654
LEU 190.4705
LYS 200.0584
GLU 210.0955
ALA 220.0768
LEU 230.0365
LEU 240.0212
ASP 250.0407
THR 260.0152
GLY 270.2365
ALA 280.0417
ASP 290.0174
ASP 300.0325
THR 310.0490
VAL 320.0242
LEU 330.0166
GLU 340.0486
GLU 350.0421
MET 360.0361
SER 370.0873
LEU 380.0862
PRO 390.0895
GLY 400.0642
ARG 410.0909
TRP 420.0256
LYS 430.0239
PRO 440.0608
LYS 450.0298
MET 460.0209
ILE 470.0201
GLY 480.0431
GLY 490.1372
ILE 500.0547
GLY 510.0289
GLY 520.0305
PHE 530.0398
ILE 540.0428
LYS 550.0084
VAL 560.0269
ARG 570.0241
GLN 580.0163
TYR 590.0513
ASP 600.0323
GLN 610.0862
ILE 620.0678
LEU 630.0593
ILE 640.0780
GLU 650.0411
ILE 660.0366
CYS 670.1768
GLY 680.1702
HIS 690.0782
LYS 700.0062
ALA 710.0239
ILE 720.0463
GLY 730.0301
THR 740.0215
VAL 750.0479
LEU 760.0263
VAL 770.0294
GLY 780.0255
PRO 790.0436
THR 800.0246
PRO 810.1403
VAL 820.3583
ASN 830.0380
ILE 840.0523
ILE 850.0276
GLY 860.0210
ARG 870.0154
ASN 880.0122
LEU 890.0189
LEU 900.0207
THR 910.0247
GLN 920.0252
ILE 930.0372
GLY 940.2390
CYS 950.0407
THR 960.2638
LEU 970.0871
ASN 980.0647
PHE 990.0537

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.