CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 41  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4005
PRO 10.0976
GLN 20.0242
ILE 30.1445
THR 40.1723
LEU 50.1249
TRP 60.1644
GLN 70.1487
ARG 80.1666
PRO 90.2209
LEU 100.1323
VAL 110.0425
THR 120.0690
ILE 130.0641
LYS 140.0641
ILE 150.0452
GLY 160.0786
GLY 170.1692
GLN 180.0554
LEU 190.2412
LYS 200.0683
GLU 210.0648
ALA 220.0253
LEU 230.0412
LEU 240.0395
ASP 250.0679
THR 260.0173
GLY 270.0646
ALA 280.0443
ASP 290.0425
ASP 300.0276
THR 310.0353
VAL 320.0211
LEU 330.0239
GLU 340.0317
GLU 350.0600
MET 360.1138
SER 370.0860
LEU 380.0953
PRO 390.1533
GLY 400.2038
ARG 410.4005
TRP 420.1183
LYS 430.1766
PRO 440.1176
LYS 450.0637
MET 460.0347
ILE 470.0125
GLY 480.0429
GLY 490.0919
ILE 500.0631
GLY 510.0316
GLY 520.0293
PHE 530.0916
ILE 540.0466
LYS 550.0215
VAL 560.0321
ARG 570.0431
GLN 580.0465
TYR 590.0684
ASP 600.0510
GLN 610.2306
ILE 620.0932
LEU 630.0475
ILE 640.0277
GLU 650.0173
ILE 660.0519
CYS 670.0985
GLY 680.1013
HIS 690.0567
LYS 700.0305
ALA 710.0437
ILE 720.0757
GLY 730.0701
THR 740.0579
VAL 750.0254
LEU 760.0205
VAL 770.0126
GLY 780.0290
PRO 790.0368
THR 800.0254
PRO 810.0805
VAL 820.1954
ASN 830.0253
ILE 840.0552
ILE 850.0458
GLY 860.0407
ARG 870.0388
ASN 880.0465
LEU 890.0362
LEU 900.0454
THR 910.0328
GLN 920.0540
ILE 930.0393
GLY 940.1312
CYS 950.0211
THR 960.1844
LEU 970.1621
ASN 980.0899
PHE 990.1142

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.