CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 42  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4038
PRO 10.1222
GLN 20.0951
ILE 30.1601
THR 40.1073
LEU 50.1354
TRP 60.1890
GLN 70.1614
ARG 80.2241
PRO 90.1322
LEU 100.0381
VAL 110.0118
THR 120.0495
ILE 130.0570
LYS 140.0495
ILE 150.0442
GLY 160.0375
GLY 170.0740
GLN 180.0780
LEU 190.0718
LYS 200.0660
GLU 210.0572
ALA 220.0434
LEU 230.0406
LEU 240.1148
ASP 250.1447
THR 260.0560
GLY 270.4038
ALA 280.0513
ASP 290.0889
ASP 300.0163
THR 310.0329
VAL 320.0577
LEU 330.0662
GLU 340.0546
GLU 350.0566
MET 360.0448
SER 370.0750
LEU 380.0621
PRO 390.0645
GLY 400.1156
ARG 410.1788
TRP 420.0642
LYS 430.0810
PRO 440.0404
LYS 450.0392
MET 460.0261
ILE 470.0213
GLY 480.0408
GLY 490.0213
ILE 500.0225
GLY 510.0284
GLY 520.0439
PHE 530.1227
ILE 540.0237
LYS 550.0366
VAL 560.0782
ARG 570.0780
GLN 580.0844
TYR 590.0716
ASP 600.0796
GLN 610.1043
ILE 620.0435
LEU 630.0294
ILE 640.0443
GLU 650.0435
ILE 660.0413
CYS 670.0412
GLY 680.0576
HIS 690.1037
LYS 700.0364
ALA 710.0125
ILE 720.0262
GLY 730.0574
THR 740.0829
VAL 750.0738
LEU 760.0676
VAL 770.0731
GLY 780.0869
PRO 790.1029
THR 800.1029
PRO 810.0711
VAL 820.2998
ASN 830.0686
ILE 840.0420
ILE 850.0549
GLY 860.0226
ARG 870.0464
ASN 880.0176
LEU 890.0324
LEU 900.0769
THR 910.0388
GLN 920.0309
ILE 930.0244
GLY 940.2194
CYS 950.0711
THR 960.3076
LEU 970.1592
ASN 980.0912
PHE 990.0675

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.