CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.6267
PRO 10.0792
GLN 20.0295
ILE 30.0460
THR 40.0325
LEU 50.0795
TRP 60.0219
GLN 70.0462
ARG 80.1059
PRO 90.0292
LEU 100.0133
VAL 110.0317
THR 120.0602
ILE 130.0459
LYS 140.0397
ILE 150.0614
GLY 160.0539
GLY 170.1404
GLN 180.0656
LEU 190.0623
LYS 200.0395
GLU 210.0396
ALA 220.0114
LEU 230.0143
LEU 240.0106
ASP 250.0373
THR 260.0297
GLY 270.0377
ALA 280.0307
ASP 290.0339
ASP 300.0115
THR 310.0212
VAL 320.0105
LEU 330.0259
GLU 340.0199
GLU 350.0892
MET 360.0770
SER 370.0916
LEU 380.1426
PRO 390.6267
GLY 400.3267
ARG 410.1096
TRP 420.0433
LYS 430.0741
PRO 440.0521
LYS 450.0784
MET 460.0614
ILE 470.0436
GLY 480.0599
GLY 490.1095
ILE 500.0470
GLY 510.0918
GLY 520.0740
PHE 530.3005
ILE 540.0854
LYS 550.0612
VAL 560.0419
ARG 570.0245
GLN 580.0657
TYR 590.1228
ASP 600.0512
GLN 610.2852
ILE 620.0991
LEU 630.0469
ILE 640.0391
GLU 650.0945
ILE 660.0434
CYS 670.0270
GLY 680.0345
HIS 690.0262
LYS 700.0390
ALA 710.0357
ILE 720.0366
GLY 730.0454
THR 740.0269
VAL 750.0070
LEU 760.0332
VAL 770.0205
GLY 780.0393
PRO 790.0830
THR 800.0570
PRO 810.0941
VAL 820.0422
ASN 830.0164
ILE 840.0293
ILE 850.0332
GLY 860.0403
ARG 870.0260
ASN 880.0369
LEU 890.0589
LEU 900.0508
THR 910.0627
GLN 920.0513
ILE 930.0318
GLY 940.0760
CYS 950.0115
THR 960.0947
LEU 970.0525
ASN 980.0501
PHE 990.0465

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.