CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 54  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.3126
PRO 10.1764
GLN 20.1005
ILE 30.0484
THR 40.0303
LEU 50.0573
TRP 60.1667
GLN 70.1482
ARG 80.1641
PRO 90.1769
LEU 100.0862
VAL 110.0548
THR 120.0235
ILE 130.0092
LYS 140.0616
ILE 150.0929
GLY 160.0964
GLY 170.1479
GLN 180.0418
LEU 190.0306
LYS 200.0169
GLU 210.0688
ALA 220.0851
LEU 230.0817
LEU 240.0793
ASP 250.3126
THR 260.1658
GLY 270.1704
ALA 280.0583
ASP 290.1047
ASP 300.0635
THR 310.1042
VAL 320.0453
LEU 330.0271
GLU 340.0394
GLU 350.0412
MET 360.1368
SER 370.0960
LEU 380.0401
PRO 390.1224
GLY 400.1188
ARG 410.1370
TRP 420.2426
LYS 430.1164
PRO 440.1221
LYS 450.1509
MET 460.0842
ILE 470.0523
GLY 480.0767
GLY 490.0871
ILE 500.0730
GLY 510.0760
GLY 520.0599
PHE 530.0808
ILE 540.0466
LYS 550.0365
VAL 560.0051
ARG 570.0257
GLN 580.0438
TYR 590.0608
ASP 600.0852
GLN 610.0851
ILE 620.0235
LEU 630.0936
ILE 640.0484
GLU 650.0709
ILE 660.0206
CYS 670.0419
GLY 680.0365
HIS 690.0582
LYS 700.0548
ALA 710.0625
ILE 720.0934
GLY 730.0894
THR 740.0737
VAL 750.0729
LEU 760.0240
VAL 770.0446
GLY 780.0540
PRO 790.0702
THR 800.0586
PRO 810.1231
VAL 820.1394
ASN 830.0768
ILE 840.0612
ILE 850.0619
GLY 860.0827
ARG 870.1562
ASN 880.1455
LEU 890.0773
LEU 900.2026
THR 910.1609
GLN 920.0785
ILE 930.1358
GLY 940.1076
CYS 950.0455
THR 960.0527
LEU 970.0954
ASN 980.0863
PHE 990.1152

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.