CNRS Nantes University US2B US2B
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Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  hiv1_open_cutoff10_ca  ***

<R2> analysis for 2604200934113787484

---  normal mode 55  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.4463
PRO 10.1059
GLN 20.4463
ILE 30.0551
THR 40.0725
LEU 50.0776
TRP 60.0226
GLN 70.0557
ARG 80.1044
PRO 90.1187
LEU 100.0560
VAL 110.0330
THR 120.0214
ILE 130.0229
LYS 140.2041
ILE 150.0161
GLY 160.0353
GLY 170.0994
GLN 180.0468
LEU 190.0512
LYS 200.0518
GLU 210.0365
ALA 220.0703
LEU 230.0418
LEU 240.0288
ASP 250.1176
THR 260.0711
GLY 270.0673
ALA 280.0439
ASP 290.0771
ASP 300.0368
THR 310.1084
VAL 320.0522
LEU 330.0618
GLU 340.0292
GLU 350.0894
MET 360.0575
SER 370.0592
LEU 380.0730
PRO 390.0690
GLY 400.0362
ARG 410.0877
TRP 420.1406
LYS 430.1171
PRO 440.0452
LYS 450.0265
MET 460.0980
ILE 470.0532
GLY 480.0227
GLY 490.0786
ILE 500.0352
GLY 510.0347
GLY 520.0220
PHE 530.0171
ILE 540.0194
LYS 550.0258
VAL 560.0642
ARG 570.0892
GLN 580.1152
TYR 590.0778
ASP 600.0376
GLN 610.0690
ILE 620.0469
LEU 630.0703
ILE 640.0928
GLU 650.0360
ILE 660.0219
CYS 670.0722
GLY 680.0845
HIS 690.0521
LYS 700.0407
ALA 710.0276
ILE 720.0259
GLY 730.0744
THR 740.0459
VAL 750.0436
LEU 760.0859
VAL 770.0668
GLY 780.0440
PRO 790.0910
THR 800.0576
PRO 810.1869
VAL 820.1063
ASN 830.1064
ILE 840.0913
ILE 850.0401
GLY 860.0612
ARG 870.0514
ASN 880.0364
LEU 890.0476
LEU 900.0641
THR 910.0983
GLN 920.0517
ILE 930.0286
GLY 940.0811
CYS 950.0491
THR 960.3163
LEU 970.0862
ASN 980.4316
PHE 990.1454

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.